Gene Rpic12D_4678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4678 
Symbol 
ID8017257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp11640 
End bp12194 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content55% 
IMG OID644828371 
Productprotein of unknown function DUF955 
Protein accessionYP_002979571 
Protein GI241589546 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTTG GTCAGGGTCC CCTAAAAGGG TTTCGTGTCC CGCCGCTCGG TGTTGCGGAT 
ATCCGGCGAA CAGCGATGCG GACGCGTGAG GCGCTCGGGC TTACGTTCCC CATTGACTTG
GGGGCCTTCC TTGAGAAGTT GTCTACCTAT CTGATTACCT TGGACGTGCT AGAGGATGGG
GCTAATGGGT TACCGACAGG AGTTGAAGCT TGTTGGATTC CGGAGTCACT AACGCTTTGT
TTGACGGAGC AAGTATACGA AAAGGCGTGC CGGAATGACC CTCGCTCCCT CTTCACCGTA
TTTCATGAGT TGGGACACGC TTTGCTCGGT CACAGGCGGA CTCTGAATCG AGAGCCTGTT
GGCGGCGCAG AAATCAAAAC GTTTGAGGAT TCGGAATGGC AGGCAAATCA GTTTGCTGCC
GAGATTCTCA TGCCCGTGGA CGAAATCAAG TACAGGGGGT TGAGAACGGG AGATGATCTC
GCCGATGCGT TCGGTGTGTC GACGGAAGCC GCGAGGATTC GAGTCGACAG ACTGAAGCGC
AGGGGCGAGA TGTAG
 
Protein sequence
MMFGQGPLKG FRVPPLGVAD IRRTAMRTRE ALGLTFPIDL GAFLEKLSTY LITLDVLEDG 
ANGLPTGVEA CWIPESLTLC LTEQVYEKAC RNDPRSLFTV FHELGHALLG HRRTLNREPV
GGAEIKTFED SEWQANQFAA EILMPVDEIK YRGLRTGDDL ADAFGVSTEA ARIRVDRLKR
RGEM