Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4650 |
Symbol | |
ID | 8022344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 1309069 |
End bp | 1310097 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644833427 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_002984561 |
Protein GI | 241666202 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0286073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCC CCGCCGCTTC TGCGCACTCA AGACATGGCC CGCCAGTCGC ACGCCAGCAG TCTTCCCATG TGGTGCATTC CGGCGACGTC CGGCTGTTTG CGCGCATGAC GCAGCCCGAC GAGGCGGCCG CACGGCAGCG CCCGGCCGTC ATCCTTGTGC ACGGTTATCC GGATGACAGT TCCGTCTGGA ATGGTGTGCG CGACGCATTG GCGCGCCATT GCCGCGTCCT CACGTTCGAT GTGCGTGGCG CAGGCCTGTC GGATGCGCCG ACCGACACCG CTGCCTACCG CATTGCGCAG TTCGTGGATG ACCTCGCCGC GGTGGCGGAC CTGCTGTTGC CCGGCGAGCG ATTTCACCTG GTCGGCCACG ACTGGGGTTC CATCCACAGT TGGGAATCCG TGACGACCGA TCGGTTACGC GGGCGCATCG CGTCGTACAC GTCGATTTCC GGACCATGCC TCGATCACGT CGGCCACTGG ATGCGCAGCC AGCTTGATGT CGGCACATGG GCAGCGAAGC GCGCTGTCTG GAAGCAACGG CTGCAGTCAT GGTATGTCGG CTATTTCCAC TTGCCGTGGG TGCCGGAATG GTCATGGCGC CTGTGGGCCG CACGTGCGTG GCCGTGGTGG TTGCGCCAGA CGGAAGGCGT GCACGGCGCG GGGCGGCGGC CATCCCTGAC GCGCGATGCG TGCAACGGTC TGTGGATGTA TCGCGCCAAC TTTCGCGAGC GGCTGGCCCA CCCGCAGGTA CGCGCGCCGC ACGCCCCCGT GCAGTTGATC GTACCAACCC ACGACCGCTA CGTGAGCCCT GCCGTCACGC GCGCGGTCGA AGCGTGGGTA TCGCACTATT GGCGGCACGA AATCGATGCA GGCCACTGGC TGCCGATGCG CCGTCCCGAG TGGGTGGCCG ATTGCATCCG CCGGTTTGCC GACTACGTGG ACTCCGGACA CGAACCCGCT GCGCTGCAAC AAGCGCGCGT ACCCGGGGTG TCCGCCGCAT TAGAAGATCC TGTCCAACGC AAACGTTGA
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Protein sequence | MSAPAASAHS RHGPPVARQQ SSHVVHSGDV RLFARMTQPD EAAARQRPAV ILVHGYPDDS SVWNGVRDAL ARHCRVLTFD VRGAGLSDAP TDTAAYRIAQ FVDDLAAVAD LLLPGERFHL VGHDWGSIHS WESVTTDRLR GRIASYTSIS GPCLDHVGHW MRSQLDVGTW AAKRAVWKQR LQSWYVGYFH LPWVPEWSWR LWAARAWPWW LRQTEGVHGA GRRPSLTRDA CNGLWMYRAN FRERLAHPQV RAPHAPVQLI VPTHDRYVSP AVTRAVEAWV SHYWRHEIDA GHWLPMRRPE WVADCIRRFA DYVDSGHEPA ALQQARVPGV SAALEDPVQR KR
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