Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4611 |
Symbol | |
ID | 8022299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1260751 |
End bp | 1261617 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644833383 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002984523 |
Protein GI | 241666164 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.144049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGTCG CGCAGCTCAA ATCGTTCTTC ATGGTCGCCC GCCTGGGCAG CATCACGCTG GCAGCCAAGC AACTTGGCCT GTCGCAGCCG ACCGTCACTT CGCAGATCCG CGCCCTGGAG GAGGCTTATG GCGTGGAGCT GTTCTACCGG GGCGGGCGCC GGCTGACCCT GTCGGATGCC GGTGTGCGGC TGATGCCGCT GGTGGACCAG CTCGTGCGCC AGGAAACCGA GATCGACTTC TTTCTGCGCA ACTCCGGTGA CATGGGCTCG GGGCACCTGC GCATCGGCGC GACGGCGCCG TATTACGTGC TCGACATCGT GGATCGCTTC TGCAAAAGCC ATCCCGGCAT CGACGTGAGC ATCGAAGCCG GCAATTCGGT GCAGATGCTC GAAGCGCTGC AGGAGTACCG CGTTGACGTG GCGTCGTCGT CGCAGCGCGT GGACGACGCG CGCTTTCTGC GCATTGAACT GGCACGCGAT CCGCTGGTGC TGGTGGTGCA TCGCAACCAC GCGCTGGCCG ACCGGACGAG CGTGCCTGTG AGCGTGCTGT CGCAATGCCG GCTGCTGGTG CGCGAAGTTG GATCGACCAC CCGCGCCATG ACCGAAACGA TGATGGCCCA GGCAGGCGTC ACGCCGGCTT CCACGGTGGA GATCGGCAGC CGGGAATCCA TCCGCGAGGC CATCACGCGC AACCTGGGCG TGAGCGTTAT CGCCCGCCAG GAAGTGCCGA GCCACGCGGA TCTGCGTGTG CTCCCGTTCG AAGGCGGCGC GCCGGAGCTG AGCGAATACT TGTACTGCCT GCAGGATCGG CGCGAGGCGC GGTTGATTGC GGCCTTCCTG AGCGAAGTCC GGCCGGTTTC TTCATAG
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Protein sequence | MLVAQLKSFF MVARLGSITL AAKQLGLSQP TVTSQIRALE EAYGVELFYR GGRRLTLSDA GVRLMPLVDQ LVRQETEIDF FLRNSGDMGS GHLRIGATAP YYVLDIVDRF CKSHPGIDVS IEAGNSVQML EALQEYRVDV ASSSQRVDDA RFLRIELARD PLVLVVHRNH ALADRTSVPV SVLSQCRLLV REVGSTTRAM TETMMAQAGV TPASTVEIGS RESIREAITR NLGVSVIARQ EVPSHADLRV LPFEGGAPEL SEYLYCLQDR REARLIAAFL SEVRPVSS
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