Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4607 |
Symbol | |
ID | 8022295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1255755 |
End bp | 1256780 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644833379 |
Product | 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component |
Protein accession | YP_002984519 |
Protein GI | 241666160 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | [TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.980284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCAC GTCTTTCCCT GCTGGCCGCC GCAATCACGT CGGCAACGAT GGCGTTTGCC ACGTCGGCGT TCGCCAAGAC CACGCTGACC GTGTACACGG CGCTGGAAGC TGACCAAGTG AAGGCATACC AGGACGCCTT CGAGAAGGCC AATCCGGATA TCGAAATCAA GTGGGTGCGC GACTCCACCG GCGTCGTCAC CGCCAAGCTG CTGGCCGAGA AGAACAACCC GCGTGCCGAC GTGGTGTGGG GCCTGGCCGC ATCGAGCCTG GCCATCCTGG ACAAGGAAGG CATGCTGACG CCGTACGCAC CGGCCGATCT GTCGAAGATC GGTGCGACTT ACCGCGACAA GGCCAACCCG CCGGCATGGG TGGGCATGGA TGCCTGGGGC GCCGCCATCT GCTTCAACAC CGTCGAAGCA CAGAAGCAGA ATCTGCCGAA GCCGACGTCG TGGGCCGACC TGACCAAGCC CGTGTATGCC GGCAAGATCG TCATGCCGAA CCCGGCATCG TCGGGCACCG GCTACCTCGA CGTGAGCGCG TGGCTGCAGA TGATGGGCGA GCAGAAGGGC TGGGCCTACA TGGACGCGCT GCACCAGAAC ATCGGCCAGT ACACGCACTC GGGCTCCAAG CCTTGCAAAA TGGCCGCCTC GGGCGAGTTC CCGATCGGTA TCGCGTTCGA ATACCGCGCG GTGAAGTCGA AGAAGGAGGG CGCCCCGATC GATATCGTGC TGCCGTCGGA AGGCCTGGGC TGGGACGTGG AAGCGACCGG CATCATGAAG GGCACCAAGA ACCTGGAAGC GGCCAAGAAG CTGGCTGACT TCTCGGCAAG CCCGGCTGCG ATGGCGCTGT ACGAGAAGAA CTTTGCCGTG GTCGCCACGC CCGGCTTCTC CAAGCCGGAT CCGCTGCTGC CGGCCGACTA CGAAAAGCAT TTGATCAAGA ACGACTTTGC ATGGGCCAGC GCCAACCGCG ATCGCATCCT CGCCGAGTGG ACGAAGCGCT ACGACGGCAA GTCGGAGAAG AAGTAA
|
Protein sequence | MTARLSLLAA AITSATMAFA TSAFAKTTLT VYTALEADQV KAYQDAFEKA NPDIEIKWVR DSTGVVTAKL LAEKNNPRAD VVWGLAASSL AILDKEGMLT PYAPADLSKI GATYRDKANP PAWVGMDAWG AAICFNTVEA QKQNLPKPTS WADLTKPVYA GKIVMPNPAS SGTGYLDVSA WLQMMGEQKG WAYMDALHQN IGQYTHSGSK PCKMAASGEF PIGIAFEYRA VKSKKEGAPI DIVLPSEGLG WDVEATGIMK GTKNLEAAKK LADFSASPAA MALYEKNFAV VATPGFSKPD PLLPADYEKH LIKNDFAWAS ANRDRILAEW TKRYDGKSEK K
|
| |