| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4583 |
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| Symbol | |
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| ID | 8022271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1228171 |
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| End bp | 1229580 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644833355 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_002984495 |
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| Protein GI | 241666136 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.674394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.416536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTTGC AATCGATCGA GTCCGGCGCA CGCACGCACA CACCGCGGGT GACGGAGATG
CAGGTGATTC CCGTCGCGGG TCGCGACAGC ATGCTGCTGA ACCTGTGCGG CGCGCATGCA
CCGTTCTTTA CGCGCAACCT CGTGATCCTG AAGGACAACG CCGGGCGTAC CGGCGTGGGC
GAGGTGCCGG GCGGGGAGGG CATCCGCCAA GCGCTGGAGC GTGTGATTCC GCTGGTGGTC
GGTCAATCGA TCGGTCGTAC CAATGGCGTG CTGAGCAGCA TTCGCCGGGC GCTGGCCGGT
GGCGGCAATG CCGCGCATCA GGCGACGGTG CACCAGGTGA CCTCCGCTTC GGAAGCGGCA
GTGCTGCGCC AGCCGCACGA GATCAACCTG CGCATGGACA ACGTCATCAC GGCGGTGGAA
GCGGCGCTGC TCGATCTGCT TGGTCAGTTT CTCGAAGTGC CGGTGGCGGA GTTGCTGGGC
GCCGGCCAGC AGCGCGATAG CGCGCCGATG CTCGCGTACC TGTTCTACGT GGGCGATCGT
CGCAAGACCG ATCTGCCGTA CCTGGAGGGC GCCAACGGCG CAGACGACTG GCTGCGCTTG
CGCCACGAAG CTGCCATGAC ACCCGCCGCC ATCGCCCGCC TGGCCGAAGC CGCCACCGAG
CGCTACGGTT TTGCCGATTT CAAGCTCAAG GGCGGCGTGA TGCCCGGCGC TGAAGAGATG
GAAGCGATTG CCGCCATCAA GGCGCGCTTT CCGCACGCCC GCGTCACGCT GGACCCGAAT
GGTGCATGGT CGCTCAACGA GGCAATTGCG CTGTGCAAGG GCCAAGGGCA TCTAGTGGCC
TATGCCGAAG ACCCGTGCGG CCCCGAAGCC GGTTACTCGG GCCGCGAGGT GATGGCCGAG
TTCAAGCGTG CCACCGGTAT CCCGACGGCC ACCAACATGA TCGCCACCGA CTGGCGCCAG
ATGGGCCACG CAGTCCAGCT GCACGCAGTC GACATTCCGC TGGCCGATCC GCATTTCTGG
ACCATGCAAG GCTCCGTGCG CGTCGCGCAG CTTTGCGACG AGTGGGGTCT GACTTGGGGC
TCGCATTCCA ACAATCACTT CGATGTGTCG CTGGCGATGT TCACGCATGT GGCCGCCGCC
GCGCCGGGCA ACATCACGGC CATCGATACG CACTGGATCT GGCAGGAGGC CCAGGAGCGC
CTGACGCGCG AGCCGCTGCG CATCCAGGGC GGCCACGTGG CCGTGCCGGA GCGCCCGGGC
CTTGGCATCG AAATCGACAT GGACCGCGTC ATGGCCGCCC ATGCGCTGTA CAAGACCCTG
GGCCCTGGCG CGCGTGATGA CGCCATGGCC ATGCAATACC TCGTGCCGGG CTGGACGTAT
GACCCGAAAC GCCCGAGCCT GAGGCGCTGA
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| Protein sequence | MTLQSIESGA RTHTPRVTEM QVIPVAGRDS MLLNLCGAHA PFFTRNLVIL KDNAGRTGVG
EVPGGEGIRQ ALERVIPLVV GQSIGRTNGV LSSIRRALAG GGNAAHQATV HQVTSASEAA
VLRQPHEINL RMDNVITAVE AALLDLLGQF LEVPVAELLG AGQQRDSAPM LAYLFYVGDR
RKTDLPYLEG ANGADDWLRL RHEAAMTPAA IARLAEAATE RYGFADFKLK GGVMPGAEEM
EAIAAIKARF PHARVTLDPN GAWSLNEAIA LCKGQGHLVA YAEDPCGPEA GYSGREVMAE
FKRATGIPTA TNMIATDWRQ MGHAVQLHAV DIPLADPHFW TMQGSVRVAQ LCDEWGLTWG
SHSNNHFDVS LAMFTHVAAA APGNITAIDT HWIWQEAQER LTREPLRIQG GHVAVPERPG
LGIEIDMDRV MAAHALYKTL GPGARDDAMA MQYLVPGWTY DPKRPSLRR
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