Gene Rpic12D_4567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4567 
Symbol 
ID8022255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1205477 
End bp1205977 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content62% 
IMG OID644833340 
ProductUspA domain protein 
Protein accessionYP_002984480 
Protein GI241666121 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.233455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.128301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACA GGATTCTGGT AGCGGTGGAT GGCAGTCCGA CGGCAGACCG AGCGCTGGAC 
GAGGCAATCC AGCTTGCACA AAAGCTCGGC TCGGAGTTGG TCATCGCCCA CGTGATCGAT
AACTCGTACC TGATGTACGA CGTTGGCTAT ATCGATGTCG GCGCCTTTAC CGAGGCCTTG
GTCAAACAAG GCAATCAAAT TGTTGCCGAC GCGCGTGCCA AGGCCGAAAA GGCAGGTGTG
CACGTCCATA GCGTCGTGGT TGACGACCCG ATCGGCACTT TCGATATCGG CACTGCCATT
GAACAGGCGG CACACAACGT CGGCGCCCAA GCCCTGGTGC TGGGCACGCA CGGGCGTCGC
GGCTTCCAAC GGTTGTTCCT CGGCAGCGTC GCCGAGAGCG TTGTGCGCCG GAGCACACTG
CCGGTGCTGC TCGTCCGCGC GGAGCCGACG GAAACGTCGC ACGCGCCTAC CGAACCGCTA
AGCAACGCCG TCATTGCCTA G
 
Protein sequence
MYDRILVAVD GSPTADRALD EAIQLAQKLG SELVIAHVID NSYLMYDVGY IDVGAFTEAL 
VKQGNQIVAD ARAKAEKAGV HVHSVVVDDP IGTFDIGTAI EQAAHNVGAQ ALVLGTHGRR
GFQRLFLGSV AESVVRRSTL PVLLVRAEPT ETSHAPTEPL SNAVIA