| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4559 |
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| Symbol | |
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| ID | 8022247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1199088 |
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| End bp | 1199735 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644833332 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_002984472 |
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| Protein GI | 241666113 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0669727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0839611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGCG TGATGATCGC CGACGATCAT GCCGTGATGC GCGATGGCGT GCGTCATATC
CTTGAGCGCG CGGGGGATTT TGAAGTCGCC TGCGAAGCCT CCGACGGTAC ACAGGTCGTG
CAACTTGTGC GTGATCATCA ACCGCAGGTG ATCGTGCTCG ATCTTTCCAT GCCGGGGCAC
AGCGGGCTGG AACTGCTCCG CCAGTTGCAT GACGATCACC CCAGGGTGCG CGTGCTGGTG
CTGACCATGC ACGCTGAAGA ACAATACGTG GCACGCGCCT TTCGTGCGGG GGCGGCCGGC
TACCTGACAA AGGAGAGCGC CGCCACCGAA CTGGTTACCG CGCTGCAGAA GGTGGCGAAC
GGCGGCACCT ACGTCAGCCC ACCCATGGCG GAGAAGCTCG CGCACAGCCT GGGCGAGCCC
AGTGAAGAGG CGGCCCACAC GCGCCTGTCC GACCGCGAGA TGGAAGTCTA TCGCCGGCTG
GTGCGCGGCG AGCCCTTGAC CGAGATCGCC ACCAGCCTGT GCGTGAGCGC CAAGACCATC
AGCACCTACA AGATGCGGCT GATGGACAAG CTGCAGCTCT CCAGCGAAGC CGCCCTTGTG
CGTTACGCGA TACGCCATCG CTTGTTTTCC GACGACGATA CGCTGTAG
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| Protein sequence | MIRVMIADDH AVMRDGVRHI LERAGDFEVA CEASDGTQVV QLVRDHQPQV IVLDLSMPGH
SGLELLRQLH DDHPRVRVLV LTMHAEEQYV ARAFRAGAAG YLTKESAATE LVTALQKVAN
GGTYVSPPMA EKLAHSLGEP SEEAAHTRLS DREMEVYRRL VRGEPLTEIA TSLCVSAKTI
STYKMRLMDK LQLSSEAALV RYAIRHRLFS DDDTL
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