| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4547 |
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| Symbol | |
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| ID | 8022235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1185707 |
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| End bp | 1186360 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644833320 |
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| Product | nitroreductase |
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| Protein accession | YP_002984460 |
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| Protein GI | 241666101 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0778] Nitroreductase |
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| TIGRFAM ID | [TIGR03605] SagB-type dehydrogenase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00573594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGAGG CGATGCTCCT GTCTTACGAC CCTGTGCAAC ATCTACTGCC ACAGCCGACG
TCCCGTGCTG CGCCGGCAAC CATTGCACTG GCGTCGCCGC TATTGGATGG CGGCAATACG
TTGATTGCAG CGCTGACCAG GCGCAAGAGC GTGCGGGAGT TCGCGCCCAC GCCGCTGTCG
CTACAGCAGC TCAGCGAATT GCTGTGGGCG GCGAATGGCA TCAACCGGCC GGAAACAGGC
GGGCGCACCG CGCCTTCAGC GCACGGGCTG AACGAGATCG ACATCTACGT CGCCCTGCCG
GAAGGTGTCT ACCAATACGA GCCGGTGGCG CACCGGTTGC GGCTCAAGCA CGCCGTCGAC
GCGCGCAACC TTACCGGCTA TCAGGATTTT GTCGGCAAGG CGCCGCTCGA CCTGGTGTAC
GTGGTGAACC ATGCACGTGC AGACCAGATG CCGGAAGCCG TGCGTGAAAC CTTTGCCGGT
GTCGCGGCGG GAGCGATCTC CCAAAACGTG TCGCTTTACT GTGCCTCCGC CAAACTGGGT
TGTGTGGTAC GTGGCTGGCT CAATCATCGC CTTCTGGCAG AAGCCTTGTC GCTCAATGAA
GACGAAGTGC CGGTGCTGGC GCAGACGGTC GGCCACCCGG CCGCCGAGCG ATGA
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| Protein sequence | MSEAMLLSYD PVQHLLPQPT SRAAPATIAL ASPLLDGGNT LIAALTRRKS VREFAPTPLS
LQQLSELLWA ANGINRPETG GRTAPSAHGL NEIDIYVALP EGVYQYEPVA HRLRLKHAVD
ARNLTGYQDF VGKAPLDLVY VVNHARADQM PEAVRETFAG VAAGAISQNV SLYCASAKLG
CVVRGWLNHR LLAEALSLNE DEVPVLAQTV GHPAAER
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