Gene Rpic12D_4544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4544 
Symbol 
ID8022232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1184100 
End bp1184417 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content56% 
IMG OID644833317 
Productribosomal subunit interface protein 
Protein accessionYP_002984457 
Protein GI241666098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00451099 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGTCC CAGTCGATAT TTCTTTCCAG GGAATTCCGC ATTCCAAGGC CGTCGAAGAA 
GCGGTTATCA AGCATGCAGA CCGCTTGAAG CGTATTCGTG CCGATCTGAT GCGGTGCCGC
GTCAGCCTTG CCGTGGGTGC CAAGCACCAG CACCAGGGCA AGCCTTTCGA CGTCAACGTC
CACGTGTTCA CACCGCATCA GACGCATATT TCGAGCAACA CCTCCAACGA GGACCCATAC
GTCGCACTTC ACGAGGCCTT CTCGCACGTG GAACGAATGC TCTTGGAAGC CGGTAGTAAA
CGCTCGTCAC AGTCTTGA
 
Protein sequence
MSVPVDISFQ GIPHSKAVEE AVIKHADRLK RIRADLMRCR VSLAVGAKHQ HQGKPFDVNV 
HVFTPHQTHI SSNTSNEDPY VALHEAFSHV ERMLLEAGSK RSSQS