| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4543 |
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| Symbol | |
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| ID | 8022231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 1182190 |
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| End bp | 1183938 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644833316 |
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| Product | PHP domain protein |
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| Protein accession | YP_002984456 |
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| Protein GI | 241666097 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1796] DNA polymerase IV (family X) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00710379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCTTTGG CCGCTTCCTA TCAATACCCC GCGAACCAGG CCATCGCCGC GATCTTCAAC
GAAATCGCTG ATCTGCTGGA GATTGAAGAG GCCAACCCGT TTCGGGTGCG TGCTTACCGC
AACGCCGCAC GCACGGTCGA AGGCATGACC GAAGGCGTTG ACGCCATGCT GGCACGCGGC
GCCGATTTGA CCGCCTTGCC GGGCGTGGGA GTCGACCTCG CGGCAAAGAT GCGCGAGATC
GTCGAAACGG GAAGCTGCGC CATGCTCACG CGCGTGCGGA CCGAGGTTCC AGCGTACGTG
CTTCAACTGC TCCAGTTGCC TGGCCTAGGC CCAAGGCGGG CCCGCGCGTT ACAGCACGAA
CTGGGCATCA CATCCCTGGA TGAGTTGGCC CGGGCCGCGG CCGCTCACCG CATTCGCGAA
CTGCATGGCT TTGGCGCCCG AAGCGAACAG CGTTTGCTCG AAGCCCTCAA CGCACGCTTG
ACGCGCGATC GCCGTTACGG TCTGGCAATC GCCAAGCCGT GTGCCGATGC ATTGACGCAT
TACCTGCTGG CAAGCGGGCT GGTCGACCAA CTCGTCGTTG CCGGCAGCTA CCGCAGAGGG
CGAGACACCG TGGGGGACCT TGATCTGCTC ATCACGGGAA GAAAACGCGC CCAGATCGTG
GAGCATCTCG TGCACTACAA CGAGGTTGCC ACCCGAATTT CAGCAGGCCC CACCCGCGCC
AGCGTCGTCC TGAAAAATGG CATGCAGGTG GACTTGCGGG TGGTGCGGCC CGATGCTTTC
GGCGCGGCGC TGGTGTATTT CACCGGCTCG AAGCCTCATA ACATCGCACT GCGCAAGCTT
GCGCAGGCCC AGGGTCTGAA GATCAACGAG TACGGCGTCT TCCGAGGAAA GGAGCGCATT
GCCGGCCAGA CGGAGGCATC GGTCTACAGC GCCGTCGGGT TGCCCTGGAT CTGCCCCGAA
CTGCGCGAAG ACCACGGGGA GATCGCAGCC GCGCAGTCGG GCCGACTGCC ATCCCTTGTT
GAGCAGGCCG ACATCAAGGG GGATCTTCAT GTCCACACAT CCGCCAGCGA TGGCACCGCC
AGCCTTGAAG CCATGGCAGC ACAGGCGCGC ATGCTGGGCT ATCAATACCT GGCGGTGACC
GACCATTCGC CGCGCATTGC CGTGACGCAC GGGCTCACCG CAGAGCGCCT GGCCGCACAA
GCCGACGACA TCGACCGCTT CAATGCCGAA CACAAGGGTT GGCCCATGCT GCTCAAGGGG
GTTGAAGTCG ACATTCTGGA GGACGGGGCA CTGGACCTGC CCGATTCGGT GCTGGGCCGC
CTGGACCTTG TGGTGGGCGC CATCCACAGC CACTTCAACC TGTCGGCTGA TCAACAGACA
TCGCGCATTC TGCGCGCGCT CGATCATCCG CACTTCAGCA TCCTCGCCCA CCCGCTGGGC
CGCCTGATCG GCGAGCGCAA CGCCTGCAAC GTGGATCTCA AGCGGGTGCT GACCGCCATT
GCCCAGCGCG GCTGCTACGT TGAGGCCAAC GCGCAGCCCG CGCGCCTCGA CCTGGCCGAC
ATTGGATGCC GCCTGGCAAA GGCGGAGGGA GTGCTCGTGA GCATTGCGTC GGACGCGCAC
AGCCCGGCCG ATCTGCTGAA CCTGCCGCTT GGTGTCACGC AGGCCCGCCG GGCGTGGCTG
GGGCAGGCAG ACGTGCTCAA TGCGCACACG CTCCACACGC TGCTTCCGTT GTTGAAGCGG
ACCATGTGA
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| Protein sequence | MPLAASYQYP ANQAIAAIFN EIADLLEIEE ANPFRVRAYR NAARTVEGMT EGVDAMLARG
ADLTALPGVG VDLAAKMREI VETGSCAMLT RVRTEVPAYV LQLLQLPGLG PRRARALQHE
LGITSLDELA RAAAAHRIRE LHGFGARSEQ RLLEALNARL TRDRRYGLAI AKPCADALTH
YLLASGLVDQ LVVAGSYRRG RDTVGDLDLL ITGRKRAQIV EHLVHYNEVA TRISAGPTRA
SVVLKNGMQV DLRVVRPDAF GAALVYFTGS KPHNIALRKL AQAQGLKINE YGVFRGKERI
AGQTEASVYS AVGLPWICPE LREDHGEIAA AQSGRLPSLV EQADIKGDLH VHTSASDGTA
SLEAMAAQAR MLGYQYLAVT DHSPRIAVTH GLTAERLAAQ ADDIDRFNAE HKGWPMLLKG
VEVDILEDGA LDLPDSVLGR LDLVVGAIHS HFNLSADQQT SRILRALDHP HFSILAHPLG
RLIGERNACN VDLKRVLTAI AQRGCYVEAN AQPARLDLAD IGCRLAKAEG VLVSIASDAH
SPADLLNLPL GVTQARRAWL GQADVLNAHT LHTLLPLLKR TM
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