| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4536 |
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| Symbol | |
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| ID | 8022224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1173800 |
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| End bp | 1175617 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644833309 |
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| Product | ribonucleotide reductase-like protein |
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| Protein accession | YP_002984449 |
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| Protein GI | 241666090 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0042263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.026709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCAG GGCCTCTGAA CCGTCCAGGC GGACCATCAC CTTTGAGTAC CGCTGTACTT
GCAGATCGCT ATCTTGCGCC CGGCGAAACG ACGTGCAATG ACGTATTCAA GCGGGTTGCC
CATGCGCTTG CCGCTGCAGA GCAGCCAGAC CAGCGCGCGC ATTTCACGCG CTTGTTCTAC
GCCAATCTGC TGCAAGGTGC CATTGGAGCG GGGCGCATCA TGGCGAACGC GGGAAGTGCG
AATCACGGGA CGATGGTCAA CTGCTTCGTG CATCCTATCG GCGCTAGCGA GCAATCCGTC
GCAGACGCTT CCGATGTCGA ACGCGCTTTG CATGCAGCAC AGCGCACCTT GCAGATGGGT
GGCGGGGTCG GCTACGACTT CTCGGTCATC GCCCCTGCTG ATGCTGAGCA GGCAACGTCG
AACAGCGGAA CTGGAAGCGT CTGTGCCGTC CTCGACTCAT TTGATCGGGT ATGCGCAACG
CAGGCGCTCG TCAACACGCG AGGTGGCGCG CAGATGGCCG TTCTGCGCTG TGACCACCCC
GACCTGGCCA CTTTCATTAC TGCCAAACGT GGGCGCAGGC GCTGGGCAAC GTTCAACCTA
TCGGTTGCCG TTACCGACGC GTTCATGCGA GCGGTTGCCG ATGACGGTCT CTGGTGCCTG
CAGCATCGAG CAGTGCCCAA TGCACAACGG CTGGCTACAG GCGCCCACGC GCTGTCTAAC
GGCAAGTGGT GCTACGCAGT CGTTCCCGCA CGGCAGCTTT GGAACATGAT CGCGGAAGCC
GCGCATCACA GTGCAGAGCC GGGTCTGCTG TTCATCGATA CGATCAACGC TGCCAATGAC
CTTGCCGAGA TCGAGACGAT TGCCGCAACC AATCCTTGTG GAGAACAACC ATTGCCGCCC
TGGGGCAGCT GTGTACTGGG GCCGATTGAT GTATCCAGGT GGGTGCAGTG GCCGTTTGGA
ATGGGCGGTC AACCACTGTT CGATTTCGTC GGCCTGAGCC GGGCGGTGCG TGTTCAAGTC
AGAATGCTCG ACAACGCGAT CGAGATCACA CGCTGGCCGT TGCCTGAGCA TATGCACGAG
GCCCAGGCCA AACGCAGGAT CGGCGTAGGC GTGACCGGCC TTGCCGATGC TCTCACAATG
ATGTGCCTGC CATACGACGC TCCGGCAGCA CGATGCTTCG CCGCTCAGAT CGGGCGATGC
TTGCGTGATA GCGCCTACGC AGCTTCGGCC GCATTGGCAT GCGAGCGCGG GCCCTATCCG
CTGTTCAGTC CGGAACGCAG TCTTGCTCCC GGACATTTCA GCGCCGCATT GCCCAAGGCC
GTGTGCGAAG CTGTCGCAAA GCACGGACTG CGCAATAGCC ACCTCCTCTC CCTGGCACCA
ACGGGTAGCG TAAGCCTGGC GTTCGGAGAT AACTGCTCCA GTGGTATCGA ACCTGCGTTC
GATTGGGTGT ATCAGCGTCG CGTGCGTATC CAACATCGCG CGCCGCAGCT TTACCGTACT
GAGAACCGCG CCTACAGGCT TTTCCGGGCG CTGTACGGAC AGCGTGCAGC GTTGCCCGGC
TACTTTGTCA CCGCAAGGCA GATTGATGGG CTCGACCACT TGCGCATGGT GGCGACGCTG
CAACCGTTTG TTGATGCATC CATTTCAAAG ACGGTCCTTC TTCCGTGCAG CGCGTCGTGC
GCACAGGTTG CGGCACTGCT CTTTCACGCA TGGCAGTTGC GACTCAAAGG CATCACGATC
TTCAGGCCGG ACACCGGTCC GGACGACGTG CTCTCCGAGC TGCCCCCATT GAACGGTCGC
CTCACGTGCT TCTGTTGA
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| Protein sequence | MRAGPLNRPG GPSPLSTAVL ADRYLAPGET TCNDVFKRVA HALAAAEQPD QRAHFTRLFY
ANLLQGAIGA GRIMANAGSA NHGTMVNCFV HPIGASEQSV ADASDVERAL HAAQRTLQMG
GGVGYDFSVI APADAEQATS NSGTGSVCAV LDSFDRVCAT QALVNTRGGA QMAVLRCDHP
DLATFITAKR GRRRWATFNL SVAVTDAFMR AVADDGLWCL QHRAVPNAQR LATGAHALSN
GKWCYAVVPA RQLWNMIAEA AHHSAEPGLL FIDTINAAND LAEIETIAAT NPCGEQPLPP
WGSCVLGPID VSRWVQWPFG MGGQPLFDFV GLSRAVRVQV RMLDNAIEIT RWPLPEHMHE
AQAKRRIGVG VTGLADALTM MCLPYDAPAA RCFAAQIGRC LRDSAYAASA ALACERGPYP
LFSPERSLAP GHFSAALPKA VCEAVAKHGL RNSHLLSLAP TGSVSLAFGD NCSSGIEPAF
DWVYQRRVRI QHRAPQLYRT ENRAYRLFRA LYGQRAALPG YFVTARQIDG LDHLRMVATL
QPFVDASISK TVLLPCSASC AQVAALLFHA WQLRLKGITI FRPDTGPDDV LSELPPLNGR
LTCFC
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