| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4478 |
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| Symbol | |
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| ID | 8022166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1113099 |
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| End bp | 1116128 |
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| Gene Length | 3030 bp |
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| Protein Length | 1009 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644833252 |
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| Product | transposase Tn3 family protein |
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| Protein accession | YP_002984392 |
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| Protein GI | 241666033 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000650614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGACCA AGAGCGAACG ATTGACCGTC CTGTCGGACG CCGAGCAGGA AGCCCTGTAC
GGCCTGCCGG ACTTCGACGA CGCCCAGCGG CTGGAATACT TGGCGTTGAC TGAAACCGAA
CTGGCGCTCG CCAGCAGCCG GCCTGGTCTC CATGCCCAGG TCTATTGCAT CTTGCAGATC
GGTTACTTCA AGGCCAAGCA TGCCTTCTTC CGCTTCGACT GGAGTGAGGT CGAGCACGAT
TGCGCCTTCG TGCTGAGCCG CTACTTCCAC GGCGAGTCCT TCGAGCACAA GCCAATCTCC
AAGCACGAGC ACTACACCCA GCGCGAGTGG ATTGCCGATC TGTTCGGCTA CCGGCCGTGG
GCGGCCGAGT TCCTGGCGCA GCTCGCGCAG CAGGCCGCGC AGACCGTGCG GCGCGACGTG
ATGCCGGGGT TCATCGCCGC CGAGCTGATC GTCTGGCTAA ACGAGCACAA GATCATCCGG
CCCGGCTATA CCACCCTGCA AGAGCTGGTG AGCGAAGCCC TGTCCGCCGA GCGTCGGCGG
CTGGCTGGCC TGCTGTCGGA AGTGTTGGAC GAATCGGCCA AGGCCGCGCT GGGTCGGCTT
CTAGTGCGTG ACGACACCCT GTCGCAATTG GCGGCGCTCA AGCAGGACGC CAAGGACTTT
GGCTGGCGTC AGATGGCCCG CGAACGCGAA AAGCGCGCCA CGCTGGAGCC GCTGCACCGG
ATCGCCAAGG CGCTGCTGCC CAAGCTCGGC GTCTCGCAGC AGAATCTGCT GTACTACGCC
AGCCTGGCGA ACTTCTACAC CGTCCACGAT CTACGCAACC TGAAGGCCGA TCAGACCTAC
CTCTACCTGC TTTGCTATGC CTGGGTGCGC TACCGGCAGC TTTCCGACAA CCTGGTCGAT
GCGATGGCCT ACCACATGAA GCAGTTGGAG GACGAAAGCA GTGCGGGCGC AAAGCAATCC
TTTGTCGCCG AGCAGGTGCG CCGTCAGCAA GACACACCGC AGGTCGGCCG CCTGCTGTCG
CTTTACATCG ACGACAGCGT GCCCGATCCC ACGCCGTTCG GCGATGTGCG CCAGCGCGCC
TACAAAATCA TGCCCCGCGA TACGCTGCAA ACCACCGCGC AGCGCATGAG CGTGAAGCCG
GTGAGCAAGC TGGCTTTGCA CTGGCAGGCG GTGGACGGCC TGGCTGAGCG CATCCGCCGC
CATCTTCGGC CGCTGTATGT CGCGCTCGAC CTCGCTGGCA CTGATCCGGG CAGCCCGTGG
CTCGTGGCGC TGGCCTGGGC CAAGGACGTG TTCGCCAAAC AGCAGCGCCT ATCGCAACGG
CCGCTCGCCG AATGTCCAGC GGCCACGCTG CCGAAACGCT TGCGACCGTA CCTGCTGACC
TTCGATGCCG ATGGCAAGCC GACGGACCTG CATGCCGACC GCTACGAGTT CTGGCTGTAC
CGCCAGGTCA GGAAGCGCTT CCAGTCGGGT GAACTCTACC TCGACGACAG CTTGCAGCAC
CGGCATTTTT CCGACGAGCT GGTTTCGCTG GATGAGAAGG CCGCCGTGCT GGCGCAGATC
GACATCCCGT TCCTGCGGCA GCCACTCGAT GCCCAGCTCG ATGCGCTCGC GACCGAGCTG
CGCGCTCAGT GGCTGGCCTT CAACCGCGAG CTGAAGCAGG GCAAGCTGAC GCACCTAGAA
TACGACAAGG ACACGCAGAA GCTGACATGG CGCAAGCCCA AGGGCGAGAA CCAGAAGGCG
CGCGAGAAGG CGTTCTACGA GCAACTGCCG TTCTGCGACG TGGCCGACGT GTTCCGCTTC
GTCAACGGCC AGTGCCAGTT CCTGTCGGCG CTGACGCCTT TGCAGCCGCG CTATGCGAAG
AAGGTCGCCG ACGCCGACAG CCTGATGGCG GTCATCATCG CGCAGGCGAT GAACCACGGC
AACCAGGTCA TGGCACGCAC CAGCGACATC CCGTACCACG TGCTGGAGAG CGCCTACCAA
CAGTACCTGC GCCACGCAAC GCTGCACGCG GCCAACGACT GCATCAGCAA CGCCATCGCC
GCGCTGCCGA TCTTCCCGTA CTACTCGTTC GACCTCGATG CACTGTACGG TGCCGTCGAT
GGTCAGAAAT TCGGCGTCGA GCGGCCGACC GTGAAAGCGC GCCACTCGCG CAAATACTTT
GGGCGCGGCA AGGGCGTGGT CGCCTACACG CTGCTGTGCA ACCACGTGCC GCTCAACGGC
TACCTGATCG GCGCGCACGA TTACGAGGCC CATCACGTGT TCGACATCTG GTATCGCAAC
ACGTCGGACA TCGTGCCGAC CGCGATCACC GGCGACATGC ACAGCGTCAA CAAGGCCAAC
TTCGCTATCC TGCACTGGTT CGGCCTGCGT TTCGAGCCGC GCTTCACCGA CCTTGGCGAT
CAGTTGAAGG AACTCTACAG TGCCGACGAT CCGGCGCTGT ACGATCAGTG CCTGATCCGG
CCGGCCGGGA GAATCGACCG CGATCTCATA GTCAGCGAGA AGCCGAACCT CGACCAGATT
GTCGCCACGC TCGGACTGAA GGAGATGACG CAGGGCACGC TGATCCGCAA GCTATGCACC
TACACCGCGC CGAACCCCAC GCGGCGCGCG GTGTTCGAGT TCGACAAGCT CATCCGCAGC
ATCTACACGC TGCGCTACCT GCGCGATCCG CAACTGGAGC GCAACGTTCA CCGCTCACAG
AACCGCATCG AGTCCTATCA CCAGCTACGC TCAACCATCG CCCAGGTCGG CGGCAAGAAG
GAATTGACCG GGCGCACCGA CATCGAAATT GAGATCAGCA ACCAGTGCGC CAGGCTGATC
GCCAACGCGG TCATCTTCTA CAACTCGGCC ATCCTCTCGC GGCTGCTGAT GAAGTACGAG
GCGAGCGGCA ACGCCAAGGC GCACGCTCTC CTGACCCAGA TATCGCCGGC GGCCTGGCGG
CACATCCTGC TGAACGGGCA TTACACCTTC CAGAGCGACG GCAAGATGAT CGACCTGGAT
GCGCTCGTGG CGGGGCTGGA GCTGGGATGA
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| Protein sequence | MTTKSERLTV LSDAEQEALY GLPDFDDAQR LEYLALTETE LALASSRPGL HAQVYCILQI
GYFKAKHAFF RFDWSEVEHD CAFVLSRYFH GESFEHKPIS KHEHYTQREW IADLFGYRPW
AAEFLAQLAQ QAAQTVRRDV MPGFIAAELI VWLNEHKIIR PGYTTLQELV SEALSAERRR
LAGLLSEVLD ESAKAALGRL LVRDDTLSQL AALKQDAKDF GWRQMARERE KRATLEPLHR
IAKALLPKLG VSQQNLLYYA SLANFYTVHD LRNLKADQTY LYLLCYAWVR YRQLSDNLVD
AMAYHMKQLE DESSAGAKQS FVAEQVRRQQ DTPQVGRLLS LYIDDSVPDP TPFGDVRQRA
YKIMPRDTLQ TTAQRMSVKP VSKLALHWQA VDGLAERIRR HLRPLYVALD LAGTDPGSPW
LVALAWAKDV FAKQQRLSQR PLAECPAATL PKRLRPYLLT FDADGKPTDL HADRYEFWLY
RQVRKRFQSG ELYLDDSLQH RHFSDELVSL DEKAAVLAQI DIPFLRQPLD AQLDALATEL
RAQWLAFNRE LKQGKLTHLE YDKDTQKLTW RKPKGENQKA REKAFYEQLP FCDVADVFRF
VNGQCQFLSA LTPLQPRYAK KVADADSLMA VIIAQAMNHG NQVMARTSDI PYHVLESAYQ
QYLRHATLHA ANDCISNAIA ALPIFPYYSF DLDALYGAVD GQKFGVERPT VKARHSRKYF
GRGKGVVAYT LLCNHVPLNG YLIGAHDYEA HHVFDIWYRN TSDIVPTAIT GDMHSVNKAN
FAILHWFGLR FEPRFTDLGD QLKELYSADD PALYDQCLIR PAGRIDRDLI VSEKPNLDQI
VATLGLKEMT QGTLIRKLCT YTAPNPTRRA VFEFDKLIRS IYTLRYLRDP QLERNVHRSQ
NRIESYHQLR STIAQVGGKK ELTGRTDIEI EISNQCARLI ANAVIFYNSA ILSRLLMKYE
ASGNAKAHAL LTQISPAAWR HILLNGHYTF QSDGKMIDLD ALVAGLELG
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