| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4460 |
|---|
| Symbol | |
|---|
| ID | 8022148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 1099113 |
|---|
| End bp | 1100534 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644833234 |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_002984374 |
|---|
| Protein GI | 241666015 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.244749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00200414 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAG GCTCCCCCAC CGAGCTTGTC GCCAGCTTTG AACGCCAGAG ACAGGCTTTC
GCGCTGGCCC CCGACCCGAC ACTGGCCACG CGCCTGTCGC GTCTCGATCG GCTCGCGGCC
TGGCTCGACT CGCACGAGCC GGACATCGTG CGTGCCATCG ACGCCGACTT TCAAGGCCGC
TCGGCGCATG AAACCCGGCT TGCCGAAGTG TTTGTCGTGC GCGCGGGCAT CCGTCATGCG
CGGCGCCACC TGAAGCAGTG GATGCGCACG CAACGCGTGC CGACCGCATT GCATTTCCGC
CCCGGCTACA ACCGGCTCAT GCCGCAGCCG CTGGGTGTGG TGGGCATCAT TGCGCCGTGG
AACTATCCGC TGCAACTGTC GTTGGGGCCA GCGCTTGCGG CGCTTGCGGC AGGCAACCGG
GTATTGATCA AGCCGTCGGA GCTCACGCCT CGGCTGTCAG CGTTGCTCGC TTCGATGGCG
CGCGAGATAT TCAACCCGGA TGAGCTCGAT GTCGCCATCG GCGATGTCGA ACTCGGCAAG
GCCTTTGCCA GCCTGCCGTT CGATCACCTG TTCTTCACCG GTTCCACGCA GGTCGGGCGT
GACGTGGCGC AAGCGGCGGC GGCCAATCTG ACGCCGGTGA CGCTGGAACT CGGCGGCAAA
TCGCCAGCCA TTCTTGATGT GTCGTGCAAT GTCGCTGTTG CGGCGCAACG CATCGCATTC
GGCAAGCTGT TGAACGCAGG GCAAACCTGC GTCGCGCCGG ATTACCTGCT CGTGCCGACA
GGTACGGCGG AAAACGTCGC ATCGCATCTG GAGCGGGCCA TCACGAAGCT CTATCCGAAT
CTGACTGCCA ACCCCGACTA CACCGCGATC ATCAGCGAAC GCCACCGTGC GCGCCTGGCA
GAGATGGTCC GCGAGGCGCG CACCGCAGGC GCACAAGTGA TCGAGGTCAA CCCGGCTGGC
GAAGTGTTCA ACGCGGCATC ACGCAAGCTC CCGCCCACGC TCGTGATTGG CGCACCCGCC
GCCACGCGGC TCATGCGTGA AGAGATCTTT GGCCCCGTGC TGCCCATTGT CGAATACGCA
AACCTCGACG ATGCGCTGGC GTATGTCCAG CGCAACGCCC GCCCGCTCGC GCTGTACTGG
TTTGGTGACG ATGCATCGCG CTGCAACCGC GCACTGCGCG AAACCGTATC GGGCGGTGTG
ACGATCAACG ATTGCCTGTG GCATCTGGCA CAGGAGAGCC AGCCGTTCGG CGGCGTCGGC
CCCAGCGGCA TGGGCGCCTA CCACGGCAAG TGGGGCTTCG ATACCTTCAG CAAGCGCAAG
CCGGTCTTTC ATCAGACCCG CTGGAATGGC ACTGCGCTGT TCCACCCGCC CTACGGCCAT
ACCTTCAACT GGCTGCTGCG CGTGCTGTCG CGCATTGCCT GA
|
|---|
| Protein sequence | MLQGSPTELV ASFERQRQAF ALAPDPTLAT RLSRLDRLAA WLDSHEPDIV RAIDADFQGR
SAHETRLAEV FVVRAGIRHA RRHLKQWMRT QRVPTALHFR PGYNRLMPQP LGVVGIIAPW
NYPLQLSLGP ALAALAAGNR VLIKPSELTP RLSALLASMA REIFNPDELD VAIGDVELGK
AFASLPFDHL FFTGSTQVGR DVAQAAAANL TPVTLELGGK SPAILDVSCN VAVAAQRIAF
GKLLNAGQTC VAPDYLLVPT GTAENVASHL ERAITKLYPN LTANPDYTAI ISERHRARLA
EMVREARTAG AQVIEVNPAG EVFNAASRKL PPTLVIGAPA ATRLMREEIF GPVLPIVEYA
NLDDALAYVQ RNARPLALYW FGDDASRCNR ALRETVSGGV TINDCLWHLA QESQPFGGVG
PSGMGAYHGK WGFDTFSKRK PVFHQTRWNG TALFHPPYGH TFNWLLRVLS RIA
|
|---|
| |