| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4459 |
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| Symbol | |
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| ID | 8022147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1097400 |
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| End bp | 1099082 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644833233 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_002984373 |
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| Protein GI | 241666014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0573714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00237498 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCAAC AGTTCGATTA CATCATCGTC GGCGGCGGCT CGGGCGGCTG CGTGGTCGCG
GGCCGGTTGT CCGAAGACCC GAACGTCTCG GTTTGCGTGC TCGAGGCGGG GGGGCATGGC
GACGGCATGA TGGTCAAGGT CCCGGCGGGC GCGGTCGCCA TGGTGCCAAC CCGCCTCAAT
AACTGGGCAT TCGATACCGT GCCGCAGGCC GGGCTTGGCG GGCGCATCGG CTACCAGCCT
CGCGGCAAGA TGTTGGGCGG TTCCTCCGCC ATCAACGCGA TGGTCTACAT CCGCGGCCAC
CGCAGCGATT ACGATCACTG GGCGTCGCTG GGCAACGGCG GCTGGTCGTA TGACGACGTG
CTGCCCTACT TCCGCCTCAG CGAGCACAAC GAGCGCTTCG ACAACGCCTG GCACGGCCGC
AACGGCCCGC TCAACGTGAG CGACCTGCGC ACCGACAATC CCTTCCAGGC ACGCTACCTT
GAAGCTGCGC GCCAGGCGGG CTTGCCGCTC ACGGACGACT TCAACGGCCC GCAACAGGAA
GGCATCGGCA TCTACCAGGT CACCCAGAAG CAGGGCGAGC GGTGGAGCGC GGCGCGTGCC
TATCTGCACC CGCACATCGG CCAACGCGCC AATCTTACGG TCGAAACGCA CGCGCAAGTC
CGTCGCATCC TGTTCGAAGG CAGGCGCGCC GTTGGCGTGG AGGTGCTGCA GAACGGCACG
GTACGCACAC TGCGCGCGCG GCGCGAAGTG GTGCTGGCTG CAGGTGCGCT CCAGACGCCG
CAGTTGCTGA TGCTGTCTGG CGTGGGGCCG GCACAGGAAC TTGCACGCCT TGGCATCCAG
GCCGTGCAGC ATCTGCCGGG CGTGGGACGC AATCTGCAGG ACCATCCCGA CTTCGTCTTC
GGCTACAGCG CACGCAGTCT CGACACAATT GGCGTCTCAC TTGGCGGCGG TGTGCGCATG
CTGGGCGAGA TCCTGCGTTT CCGCCGCGAG CGGCGCGGCA TGCTGACAAC GAACTTCGCC
GAAGGTGGTG GCTTCCTGAA GACACGCCCC GAGCTTGAGG CACCCGACAT CCAGCTGCAT
TTCGTGGTGG CGATGGTGGA CAACCACGCG CGGCGCATGC GCCTGGGCCA TGGGTTCTCG
TGCCACGTCT GCCTGCTGCG TCCGCGCAGC CGGGGCGGGG TCACGCTGCG CAGCAACGAT
CCGCTCGCCG CACCGCTCAT CGACCCGGCC TTCTTCGATG ACCCGCGCGA TGTCGAAGAC
ATGGTGGCCG GCTTCAAGAT CACGCGCGGG CTCATGCAGA CGCCCGCACT CGCCAAGTGG
GCCACACGCG ACCTCTTCAC CTCGCACGTG AAGACCGACG AAGACATCCG CGCAATCCTG
CGGCAGCGCA CCGATACCGT CTATCACCCT GTTGGCACCT GCCGCATGGG CCAGGACGAG
ATGGCCGTGG TCGACCCACA ACTGCGCGTG CACGGCCTGG AAGGATTGCG TGTTGTCGAT
GCGTCGATCA TGCCGACGCT GATCGGCGGC AACACCAATG CGCCCACCAT CATGATCGGT
GAGAAGGCTG TCGATCTGAT CCGCGGTGTC AGCCGCGTCA CGTCCGGCAC GCGCGAAGAA
GCGGAAGCCG CCGTAGCGAA GTCCGCGATC CATCACCAAG AAACCCGTCA TGCAACCACC
TGA
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| Protein sequence | MNQQFDYIIV GGGSGGCVVA GRLSEDPNVS VCVLEAGGHG DGMMVKVPAG AVAMVPTRLN
NWAFDTVPQA GLGGRIGYQP RGKMLGGSSA INAMVYIRGH RSDYDHWASL GNGGWSYDDV
LPYFRLSEHN ERFDNAWHGR NGPLNVSDLR TDNPFQARYL EAARQAGLPL TDDFNGPQQE
GIGIYQVTQK QGERWSAARA YLHPHIGQRA NLTVETHAQV RRILFEGRRA VGVEVLQNGT
VRTLRARREV VLAAGALQTP QLLMLSGVGP AQELARLGIQ AVQHLPGVGR NLQDHPDFVF
GYSARSLDTI GVSLGGGVRM LGEILRFRRE RRGMLTTNFA EGGGFLKTRP ELEAPDIQLH
FVVAMVDNHA RRMRLGHGFS CHVCLLRPRS RGGVTLRSND PLAAPLIDPA FFDDPRDVED
MVAGFKITRG LMQTPALAKW ATRDLFTSHV KTDEDIRAIL RQRTDTVYHP VGTCRMGQDE
MAVVDPQLRV HGLEGLRVVD ASIMPTLIGG NTNAPTIMIG EKAVDLIRGV SRVTSGTREE
AEAAVAKSAI HHQETRHATT
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