| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4396 |
|---|
| Symbol | |
|---|
| ID | 8022084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 1029375 |
|---|
| End bp | 1029776 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644833171 |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_002984311 |
|---|
| Protein GI | 241665952 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.742321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCTG CTCTCCCCGC GCCCATTTCC AATGCGCATA CCGGCGACCT GTCCATCGGC
GACTTGGCTG CTGCCACCGG CGTCTCGCGG GATGGCCTGC GCTTTTACGA GGCACGTGGA
CTGATCCGTG CGCGGCGCCG GAGCAACGGT TACCGCGCCT ATCCGCCCGA AATCGTGGAA
CTGGTGCAGT ACGTCCGCAC GGCCCAGCAG CTGGGTTTCA CACTGGCGGA AATTAGAGAA
GGCATGGCGC AGGTGTGGCA GCAACCCGAC ACCGTTGCCG CCGTCACCGC GTTGCTGCGG
GAGAAACTTG CCACCATTGA TGCCCGCATC GCCAGCCTGC AGGCCATGCG AGAGGCACTT
GCCACGCGCG TCGGCATGGC ATGTCCACTT GCACCGGCCT GA
|
|---|
| Protein sequence | MPAALPAPIS NAHTGDLSIG DLAAATGVSR DGLRFYEARG LIRARRRSNG YRAYPPEIVE
LVQYVRTAQQ LGFTLAEIRE GMAQVWQQPD TVAAVTALLR EKLATIDARI ASLQAMREAL
ATRVGMACPL APA
|
|---|
| |