Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4339 |
Symbol | |
ID | 8022027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 957521 |
End bp | 958297 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644833114 |
Product | protein of unknown function DUF82 |
Protein accession | YP_002984254 |
Protein GI | 241665895 |
COG category | [S] Function unknown |
COG ID | [COG1656] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.172322 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCG TCGTCCTCAC GTTCGATTCC AATCTGACGC CGCTTCTTCC GCAGGCGTTG CGCGGGCATC CCGTTGCACG CGCGTGGGCA GACGGCGCCA CGCTCAAGCA CGCTATCGAG GCACTTGGCG TGCCGCATAC GGAAGTAGGG CAAGTCCTGG TGGACGGCCG GCCCATGGCG CTGGAGGCCA TGTTGCCCGC CCGGGGCTAC ATTGCCGTTT CAGCGGTGGA GCCCCTGTTG CCCACCGCGC CGCTGCACTT TCTGTGCGAC GCCCACCTGG GCGCAACGGC GCGCTTGCTG CGCATGGCCG GCTTCGATAC CGCCTACGAC AACAACTACG CCGACGCGGC CATCGAAGCT CTCGCGAACG GAGAAGACTG GATCGTGCTC TCGCGTGATC GTGAACTCCT CAAGCGACGG GGCATCCGTC GTGGCGCGTT CATCCGTGCG CGTGAGCCGC AAGCGCAGAT GCGCGAAATC GTCATGCGCC TCCGGCTGGC CGATGTGGCC AGGCCGTTCT CTCGCTGTCT CGAATGCAAT GTGCCGTTGC GGATGCTGCG CCCGGAAGAG GCTTCCGCCA GCGTGCCGCC CCGCGTGCGT GAGCGCCAGC GGCTCTTTAG CACCTGTGAT GTCTGCCGCC GCGTCTATTG GCCCGGTTCG CACTGGGCGC GCATGAATGC CGTGTTGGCC GACATGCTTT CGCCCGAGGC CGACGCATCC ACAGACACAG CAGAAGCTGC CGAGCGTATG CCGCGCACCG GCAGCGCGGG CGCCTGA
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Protein sequence | MQTVVLTFDS NLTPLLPQAL RGHPVARAWA DGATLKHAIE ALGVPHTEVG QVLVDGRPMA LEAMLPARGY IAVSAVEPLL PTAPLHFLCD AHLGATARLL RMAGFDTAYD NNYADAAIEA LANGEDWIVL SRDRELLKRR GIRRGAFIRA REPQAQMREI VMRLRLADVA RPFSRCLECN VPLRMLRPEE ASASVPPRVR ERQRLFSTCD VCRRVYWPGS HWARMNAVLA DMLSPEADAS TDTAEAAERM PRTGSAGA
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