Gene Rpic12D_4315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4315 
Symbol 
ID8022003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp928359 
End bp930521 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content64% 
IMG OID644833090 
Productacid phosphatase 
Protein accessionYP_002984230 
Protein GI241665871 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3511] Phospholipase C 
TIGRFAM ID[TIGR03397] acid phosphatase, Burkholderia-type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.480348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAG CGCTTCGTCT TTTGCCGCTG ACCGCGTTGG TTGCTGCCAG CATGTCTGCC 
TGTGGTGGCA GTGATTCGAA CAGCAGTGCC TCCGCGTCCA CCTCTGGCGT GGTGACCGGC
AGCTACTTCG AACATGCCAA AGTTTGTATC GACGCCAACA ACAACGGCAA GTGCGATTCG
GGTGAAGCCA GCACCTATAC CGATGCCAAC GGCGCGTACT CGCTGTCGGG CACGGGCGCC
ATCACCGTGG AAATCGGCAC GGACGCTTTC CGCAACGACC CGGACAAGGG TACGCATACG
GCCATCACGC AGCCGCTGGT GTTCCGCGCA CCGGCCGGTG CCAATGCTGT TGTCAGCGCC
ATCTCGACCG AACTGGCGGT GCTGATGGAC AGCAACGGCG GTGACATCAA CGCTGCCAAG
ACGGCACTGG CCGCTCGCCT TGGCGTGACG ATCGACAAGC TGCTGGAAGA CCACAACAAG
GAAACCGACG CTGACACCAA AACTGCGCTG CAGGCTGAGA TCGACCAGGC CATCGATCTG
ATCGCTGACG CCGTTGCCAA TGGTGGCGAC ATCGACAAGC GCCTGCACGA CGGGGTGACC
AAGCGCATGG CGCTGGCAAA CAACGTCAAA ACGATCGTGG TCATCTACGC AGAAAACCGC
GGTTTCGACA ACCTGTACGG CCTGTTCCCG GGCGCCAATG GCATCCCCGG TGTGAACCCG
ACCTCGACGG GCACTGCCGT TGCGCAGAAA GACTTCGACG GCTCCGTGCT GCCGACGCTG
CCGCCCACCT GGGGTGGCGT GACCGCCGCC GGCCAGAGCG TGCAGATCAC GCAGGCTTCC
ACCGCCAACA TGCCGAACCA GATGTTCCAG ATCGACAGCC CGTCGGGCTT CGGCAGCACG
GGCACGGTGG TCGGCCAGAA CGTCATCACG CGTGACCTCT GGCACCGCTT CTATCAGAAC
CAGATGCAGA TCAACGGCGG CAAGAACGAC AAGTTCGCCG CCTTTGCCGA TGCCGGCGGC
CTGACCATGG GCTACTACGA CGGCAGCAAG ATGGCCATGT GGAACATCGC CAAGCAATAC
ACGCTGGCGG ACAACTTCTT CATGGGCGCC TTCGGCGGTT CGTTCCTGAA CCACCAGTAC
CTGGTCTGCG CGTGCGCACC GATCTACCCG AACGCAAAGG CGTCGCCGGC GGTCAACAGC
ATTGCCAACG TCAAGACGAA TGCAGACGGC AGCCCGACGC TCATCCCGGC TGCAAGCTCG
GTGATGGCCG GTGCGCCGAC CTCATACGCA GGCGCTGGCG ACGATGGCAA TCCCACGAAG
GACGGCAGCC TGACGCCGGT CGACAGCAAC GGCAACTCGT ACGCCGTCAA CACGATGCAG
CCGCCGTACC AGCCCTCGGG CAACGCCGTA GCCAGCGGCA ACGCAGCCTA TGCTGATCCG
ACCAAGGCGT CGACGATGCC GAAGCAGTCG ACCACCAACA TCGGTGACCT GCTGACCGCC
CGTGGCGTGG ACTGGGCCTG GTACGCCGGC GCCTGGAACG CGGCCATCGC CGACGCTCCG
AACACCACGC GCAGCGTGAT CTACAGCGGC GCGATCCAGT TCCAGCCGCA CCACCAGCCG
TTCAACTACT TCAGCCGCTT CGACCCGGCC ACGACCACCG GCGCCGCCGA GCGTGCGGCC
CACCTGCGCG ACTACGACGC CGCCTTCCTG CAAGACGCAG CCGCAGGCAA GCTGCCCGCC
GTCACGTTCT ACAAGCCGCA AGGCAACCTG AACCAGCACC CGGGCTACGC CAATGTGGCT
GACGGCGACG CGCACATCGT CAACGTGATC GCCCAGCTGC AGAAGAGCCC GCAGTGGAAG
AACATGGTGA TCGTCGTGAC GTATGACGAA AACGGTGGCT TCTACGACCA CGCCACGGTG
CCGAAGGCCG ACCGCTGGGG CCCGGGCACG CGTATCCCGG CGATCATCGT CTCGCCGTTC
GCCAAGAAGG GTTTCGTTGA CCACACCCAG TACGACACGG CTTCGGTCCT GCGCCTGATC
ACGCACCGCT TCGACCTGCC GACGCTGCCG GGTATCAAGC AACGTGACGA CGCGCTCGTC
TCCAACGGCA ACAAGCCGAT GGGCGACCTG ACCAACGCGC TGGATTTCAC GCAGGCTCAA
TAA
 
Protein sequence
MSRALRLLPL TALVAASMSA CGGSDSNSSA SASTSGVVTG SYFEHAKVCI DANNNGKCDS 
GEASTYTDAN GAYSLSGTGA ITVEIGTDAF RNDPDKGTHT AITQPLVFRA PAGANAVVSA
ISTELAVLMD SNGGDINAAK TALAARLGVT IDKLLEDHNK ETDADTKTAL QAEIDQAIDL
IADAVANGGD IDKRLHDGVT KRMALANNVK TIVVIYAENR GFDNLYGLFP GANGIPGVNP
TSTGTAVAQK DFDGSVLPTL PPTWGGVTAA GQSVQITQAS TANMPNQMFQ IDSPSGFGST
GTVVGQNVIT RDLWHRFYQN QMQINGGKND KFAAFADAGG LTMGYYDGSK MAMWNIAKQY
TLADNFFMGA FGGSFLNHQY LVCACAPIYP NAKASPAVNS IANVKTNADG SPTLIPAASS
VMAGAPTSYA GAGDDGNPTK DGSLTPVDSN GNSYAVNTMQ PPYQPSGNAV ASGNAAYADP
TKASTMPKQS TTNIGDLLTA RGVDWAWYAG AWNAAIADAP NTTRSVIYSG AIQFQPHHQP
FNYFSRFDPA TTTGAAERAA HLRDYDAAFL QDAAAGKLPA VTFYKPQGNL NQHPGYANVA
DGDAHIVNVI AQLQKSPQWK NMVIVVTYDE NGGFYDHATV PKADRWGPGT RIPAIIVSPF
AKKGFVDHTQ YDTASVLRLI THRFDLPTLP GIKQRDDALV SNGNKPMGDL TNALDFTQAQ