Gene Rpic12D_4227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4227 
Symbol 
ID8021915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp829194 
End bp829673 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID644833005 
ProductPEBP family protein 
Protein accessionYP_002984145 
Protein GI241665786 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.91737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG CCTTGACCTC TCCGGCCTTT GCCGCTGGCG GCGAAATCCC CAGCCGCCTG 
ACATGTGAAG GCGCGGACAC ATCGCCGCCG CTCGCGTGGA CCGGCGCCCC GGCAGGCACA
CGCAGCCTGG CGCTGATCGT CGATGACCCC GACGCGCCCG ACCCCGCAGC ACCCAAGATG
ACGTGGGTCC ACTGGGTGCT CTACAACATC CCGCCCGGCA CCACTTCGCT GGCAGAAGAT
GCATCACGCA AGGGACTGCC TCCGGGTGCT CGCCCCGGCA ACAACGACTG GCAGCGCACC
GCTTACGGCG GCCCCTGCCC GCCCATTGGG CGTCATCGCT ACTATCACAA GCTTTACGCG
CTGAACGTGG AACTACCGGA GCTTGGCGCA CCCACCAAGG CCGAACTGGA GCGCGCCATG
CGTGGCCACG TGCTGGCTGA AGCCGAGCTC GTCGGTACCT ACCAGAAACA CAAACCCTGA
 
Protein sequence
MTLALTSPAF AAGGEIPSRL TCEGADTSPP LAWTGAPAGT RSLALIVDDP DAPDPAAPKM 
TWVHWVLYNI PPGTTSLAED ASRKGLPPGA RPGNNDWQRT AYGGPCPPIG RHRYYHKLYA
LNVELPELGA PTKAELERAM RGHVLAEAEL VGTYQKHKP