Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4219 |
Symbol | |
ID | 8021907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 821878 |
End bp | 822978 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832997 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_002984137 |
Protein GI | 241665778 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACG TTGTCGAATC GGCTATTTCG ATCGAGAAGC GCCCGAACCC TGTTCCGGCG GAAGAGCGCG CGCGCCTGCT GGAAAACCCC GCTTTCGGCC GCGTCTTCAC GGATCACATG GCCACCATCC GCTACACCGA GGGCAAGGGC TGGCACGACG CCAAAATCGG CGCGCATGGC CCGATCCAGT GCGATCCGTC CACGCTGGTG CTGCACTACG CGCAGGAAAT CTTCGAGGGC ATGAAGGCCT ACCGCCTGCC GGACGGCGGC GGTGCGCTGT TCCGCCCGGA AGCCAATGCG CGCCGGTTCC AGAATTCCGC CAAGCGCCTG GCGATGCCCG CGCTGCCGGA AGACCTCTTC CTGCAGGCCG TGCGCGAGCT GGTCAAGCTC GATCGCGACT GGATTCCGTC GGGCCAGGGC TCGGCGCTGT ACCTGCGCCC GTTCATGATC GCCACCGAAG TGGTCCTGGG CGTGAAGCCT TCGGCCGAAT ACCTGTTCTG CGTGATTGCG TGCCCGGTGG GCGCGTACTT CAAGGGCGAT GCATCGTCGG GCGTCACCAT CTGGGTGTCG GACAACTACA CGCGCGCCGC ACCGGGCGGT ACGGGCGAGG CCAAGTGCGG CGGCAACTAC GCCGCCAGCC TGGTCGCTCA AGCTGAAGCC ACCCGCGAGG GCTGCGACCA GGTCGTCTTC CTCGACGCGG TGGAGCGCAA GTGGATCGAA GAGCTGGGCG GTATGAACGT GTTCTTCGTC TTCGATGACG GTTCGCTGCA GACGCCGCCG CTGACTGGCA CGATCCTGCC GGGCATCACG CGCGATTCGT TGATCACGCT GGCGCGCGGC ATGGGCCTGA CCGTGCGCGA AGAGCCGTAC TCCATCGACC AGTGGCAGGC CGACGCCCAA AGCGGCCGCC TGCGTGAAGC CTTTGCGTGC GGCACCGCAG CGGTCGTCAC GCCCATCGGC AAGGTCAAGG GCCACAAGCA CAACTTCACC ATCGGCGATG GCAAGGCAGG CGAGCTGACG ACCAAGCTGA AGGCGGCGCT GGTCGATCTG CAGAACGGCC GCGCACCGGA CCCGCACGGC TGGCTGGACC GCCTGTTCTG A
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Protein sequence | MNNVVESAIS IEKRPNPVPA EERARLLENP AFGRVFTDHM ATIRYTEGKG WHDAKIGAHG PIQCDPSTLV LHYAQEIFEG MKAYRLPDGG GALFRPEANA RRFQNSAKRL AMPALPEDLF LQAVRELVKL DRDWIPSGQG SALYLRPFMI ATEVVLGVKP SAEYLFCVIA CPVGAYFKGD ASSGVTIWVS DNYTRAAPGG TGEAKCGGNY AASLVAQAEA TREGCDQVVF LDAVERKWIE ELGGMNVFFV FDDGSLQTPP LTGTILPGIT RDSLITLARG MGLTVREEPY SIDQWQADAQ SGRLREAFAC GTAAVVTPIG KVKGHKHNFT IGDGKAGELT TKLKAALVDL QNGRAPDPHG WLDRLF
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