Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4138 |
Symbol | |
ID | 8021826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 737760 |
End bp | 738464 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832918 |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_002984058 |
Protein GI | 241665699 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.60462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGAAC ACGATACAAA CTCGCGCCCC GGCATCAGCC GCGCACGGCT GGCGCATATC GCGGCGTGGT CGATTGATCT GCCCGCGGAA GAAGCCGACC GCGCCTGCGC CGGCATCGTT GAAAAAACCT ACGCACGCGG CGCGTGCATC TGCCCGAAAA ACACGTTGCT GGAAAGCTGG ACGGGCGTGG TCACGGGCCT CATCAAAATC GGCACGGTAT CGCCCGAGGG GCGCAGCGTC ACGTTTACGG GCGTGCCTGC CGGCGGCTGG TTTGGCGAAG GCACGGTGCT CAAGAACGAG CCGCGCCGCT ACGACATCGT TGCGCTGCGC GACACACGCA TGGCCTTCAT GGAGCGCGCC ACCTTCATGT GGCTGGTGGA AAACAGCGTG GCGTTCAACC GCTTCCTGGT CAAGCAGCTC AACGAGCGGC TCGGGCATTT CATGGCGCTG CTGGAATACG ACCGGCTGCT TGATGTCACG CCGCGCCTGG CGCGTTGCAT TGCGTCGCTG TTCAACCCGG TTCTCTACCC CGGCGCGGGC GACCACCTGG AGATCACGCA GGAAGAACTC GGCCTGCTTT CCGGCATGAC GCGCCAAGTT GCCAACCAGT CGCTCAAGAC CCTGGAGAAG GACGGCGTGG TGCGGCTGGA ATACGGCGGC GTGACGGTCG TGGACCTCGA TCGGCTGCGC AGCTACGGCG CCTGA
|
Protein sequence | MAEHDTNSRP GISRARLAHI AAWSIDLPAE EADRACAGIV EKTYARGACI CPKNTLLESW TGVVTGLIKI GTVSPEGRSV TFTGVPAGGW FGEGTVLKNE PRRYDIVALR DTRMAFMERA TFMWLVENSV AFNRFLVKQL NERLGHFMAL LEYDRLLDVT PRLARCIASL FNPVLYPGAG DHLEITQEEL GLLSGMTRQV ANQSLKTLEK DGVVRLEYGG VTVVDLDRLR SYGA
|
| |