| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4104 |
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| Symbol | |
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| ID | 8021792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 703117 |
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| End bp | 704634 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644832885 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002984025 |
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| Protein GI | 241665666 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.340706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTAC AGCGCGCCAC TGGTGCACTC CTGCGGCGGC CTTCTCTGCT GATCATCGGC
GCGTCGGCGC TGTCGCTGGT GCTGGCCGCG CTGACCGCGC TCTCGCTCTG GGAAATGCGC
TCGGACGCAC TGGCCCGCGC GCGCGATGCC GCCGACAACC TCGCGCTGAT CCTGCAGCGC
GACATTGCCC GCAACATCGA GGTGTACGAC CTGTCGCTGC AGGCCGTGAT CGACGGCGTA
CGCGACCCCG CCATGCTGGC GCTGCCGCCC GCCGTACGCC AGCTCGTGCT GTTCGACCGG
TCGACCAACG CGCAGGACCT GGGCTCGCTG CTGGTGACCG ACAAGGCCGG CGACGTGGTC
ATCGATTCGC ACTCGGTGCC GCCGCGGCAC ATTTACCTCG GTGACCGCGA TTATTTCCAA
GTACATCAAG CCTCCGACGA CGTCGGGCTG TATATCAGCG AGCCGTTCAT GCCGCGCGCG
ACTGGCCTCG AGCGATCGCT GGGACTCAGC CGGCGCCTGA ACGGCCCGCA CGGCGAATTC
AACGGCATCG TGGTCGGCAC GCTGCGGCTG AACTACTTCA GGCGGCTGTT CGACGGCATC
AACCTGGGGC CCCACGCCAC CGTCACGCTG ATCCGCACCG ACGGCACGCT GCTCATGCGG
CGCCCGTACA ACGAAAAGCT CATCGGCCGC AACCTGGCCG ATGCCACCGC GTTCCAGAAG
CGGCTGCTCG CACCAGAAGG CTCGTATGTG GACATCGCGG GCATTGACGA TATCGAGAGG
CTGTTCAGCT TCCGCCATAT CGGCGACCAC CCGCTGATCG TCACCGTTGG CCTTGCCACC
GAAGACATCT ATGCTGAATG GTGGCGGCGC GCATGGGTGA TCAGCGGCAT CGTGCTGATG
CTTGACGCGG TGTTCATCGT GCTGTCATTC CTCTTTGCGC AGCAGCTGCG CAAGCGGCTC
GAGATGGAGC AGCAATTGCA TCTGCTGGCC AATACCGACA GCCTGACCGG ACTTGGCACG
CGCCGCGCCT TGGATTCCGC CCTCGACGTG GAGTGGCGCC GCGCCAATCG GCATCACACC
CCGATGGCGG TGCTGATGAT CGACGTGGAC GACTTCAAAC CCTACAACGA CAGGTACGGC
CACGCCGCCG GCGACACCGC CCTGCGCACG GTGGCACGCT GCATCAACGA CAGCATCAAG
CGCCCCGGCG ACTTTGCCGG CCGCTATGGC GGCGAGGAGT TCTGCGCCGT GTTGCCGAAC
ACCGACCTGG GCGGCGCCGC GCGCGTTGCC GAGAGCATCC GCGCTGCCGT TCTGGCCGCC
AACGAGCGCA ATGCTGGCAG CGCGTACGGC AAGCTGACCG TGAGCATCGG CGTGGCGGTG
CATTCGGGCA TTGCCGCCGA GGACGACACG CTGGAAGACC TCGTTCGACT GGCGGACGGG
CGGCTGTATG AAGCCAAGGC CGCCGGCCGC AACGTGGTCA TGCCGCGACA CGAGCGGCCC
AAGCCGGCTG TCGTCTAG
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| Protein sequence | MPLQRATGAL LRRPSLLIIG ASALSLVLAA LTALSLWEMR SDALARARDA ADNLALILQR
DIARNIEVYD LSLQAVIDGV RDPAMLALPP AVRQLVLFDR STNAQDLGSL LVTDKAGDVV
IDSHSVPPRH IYLGDRDYFQ VHQASDDVGL YISEPFMPRA TGLERSLGLS RRLNGPHGEF
NGIVVGTLRL NYFRRLFDGI NLGPHATVTL IRTDGTLLMR RPYNEKLIGR NLADATAFQK
RLLAPEGSYV DIAGIDDIER LFSFRHIGDH PLIVTVGLAT EDIYAEWWRR AWVISGIVLM
LDAVFIVLSF LFAQQLRKRL EMEQQLHLLA NTDSLTGLGT RRALDSALDV EWRRANRHHT
PMAVLMIDVD DFKPYNDRYG HAAGDTALRT VARCINDSIK RPGDFAGRYG GEEFCAVLPN
TDLGGAARVA ESIRAAVLAA NERNAGSAYG KLTVSIGVAV HSGIAAEDDT LEDLVRLADG
RLYEAKAAGR NVVMPRHERP KPAVV
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