Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4090 |
Symbol | |
ID | 8021778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 685213 |
End bp | 686010 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832871 |
Product | enoyl-CoA hydratase |
Protein accession | YP_002984011 |
Protein GI | 241665652 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.157339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.241539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAC TGGAAACACT GCACCAGAAC ACCGTCGCGG TGCTGACGCT CAAGCGTCCG CCAGCCAACG CGTTCACGCC GGAAGGTCTG CTGCAACTGC AAGGCACCGT CGCACGATTG AACGCCGATG CACGCGTGCG CGCCCTCGTC GTCACCGGCG ATGGTCCGAA GTTCTTCAGC GCAGGCGCAG ACCTCAACAC CTTTGCCGAT GGCGACCGCG ATGTGGCGCG CGAGGCCGCT GCACGTTTCG GTGCCGCGTT CGAGGCGCTG CAGAATGCGC GCCCGGTGGT GATCGCCGCC ATCAACGGTT TTGCGATGGG CGGCGGCCTG GAGTGCGCGC TCGCATGCGA CATCCGCATC GCCGAGGCAC ACGCCAAGCT GGCCGTGCCA GAAACGGCCG TCGGCCTGCT GTGCTGCGGT TGCGGCACGC AGACACTGCC ATGGCTCGTG GGTGAAGGCT GGGCCAAGCG CATGATCCTG ACCGGCGAGC GCGTCGATGC GCAGACCGCC CTGCGTATCG GACTGGTGGA AGAGGTCGTG GAAACGGGGG CCGCGCGCGA AGCCGCCATC GCCATGGCGC TGCGTGTGAC AACGTTGAGC CCGCAAGCCG TCACCTTCAG CAAGCAACTC ATCCATCAGG CGCGCAACGG CGTGCCGCGC GGCGCGGCGC TGGCCGTCGA GCGTGAGCGC TTTGTCGATC TGTTTGACCA CCCGGATCAG CGCGAAGGCG TGAACGCCTT TCTGGAGAAG CGTGCGCCGC GCTGGCATTC CACGCACGAA TCGGAGACGC GGCAATGA
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Protein sequence | MIELETLHQN TVAVLTLKRP PANAFTPEGL LQLQGTVARL NADARVRALV VTGDGPKFFS AGADLNTFAD GDRDVAREAA ARFGAAFEAL QNARPVVIAA INGFAMGGGL ECALACDIRI AEAHAKLAVP ETAVGLLCCG CGTQTLPWLV GEGWAKRMIL TGERVDAQTA LRIGLVEEVV ETGAAREAAI AMALRVTTLS PQAVTFSKQL IHQARNGVPR GAALAVERER FVDLFDHPDQ REGVNAFLEK RAPRWHSTHE SETRQ
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