Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4089 |
Symbol | |
ID | 8021777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 684320 |
End bp | 685213 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832870 |
Product | 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_002984010 |
Protein GI | 241665651 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.772372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.24894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG CATTCATCGG TTTGGGAAAC ATGGGCGCCC CCATGGCGCG CAATCTGCTC AAGGCAGGCC ATGTGCTCAG CGTGTTCGAC CTGAATACGC AGGCAGTGGG CGTGCTGGTG GAAGCCGGTG CCATGGCCGC CGCGTCTCCC AAGGACGCCG TGGCCGGCGC GGAGACCGTG ATCACCATGC TGCCCGCCGC CGCGCATGTG CGCCACGTGC TGACGGCGGA AGACGGCGTG CTGGCGGGCA TCGCGAAGGG CGTGCCCATC ATCGATTCGA GCACCATCGA CCCAGCGAGT GCGAAGGCAC TTGCCGCGCT GGCAGCCGAG CACGGCAATC CTTTCGTCGA TGCGCCAGTC TCTGGCGGAA CGGGTGGTGC AGCGGCTGGC ACTTTGACCT TCATGGTGGG CGGCAGCGCG GCGGCGTTCG AACAGGTGCG CCCGGTGCTT TCTGCCATGG GCAAGAACCT CGTGCATTGC GGCGACACCG GCGCGGGGCA AGGCGCGAAG ATCTGCAACA ACCTCGTGCT CGGCATCACC ATGGCCGGCG TGGCCGAAGC CATGTCGCTG GGCGAGGCGC TGGGCATCGA CCCGAAGGTG CTGGGCGGCA TCATCAACAC GTCGACGGGT CGGTGCTGGA GTTCGGACAC CTACAACCCG TTCCCCGGCG TGATCGACAC CGCGCCATCT TCGCGCGGCT ACACGGGTGG CTTTGGTACC GACCTGATGC TCAAGGATCT GGGCCTGGCC GGTGACGCAG CAAAGTCCGT CCGACAGCCG GTCTACCTTG GCGCGTTGGC ACAGCAGCTG TATCAAACCG TGAGCAGCAA GGGCGATGGC AAGCTGGATT TCTCCGCCGT CATCAAGCTC TATCGGAAAG ACGGAGCGGC GTGA
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Protein sequence | MKIAFIGLGN MGAPMARNLL KAGHVLSVFD LNTQAVGVLV EAGAMAAASP KDAVAGAETV ITMLPAAAHV RHVLTAEDGV LAGIAKGVPI IDSSTIDPAS AKALAALAAE HGNPFVDAPV SGGTGGAAAG TLTFMVGGSA AAFEQVRPVL SAMGKNLVHC GDTGAGQGAK ICNNLVLGIT MAGVAEAMSL GEALGIDPKV LGGIINTSTG RCWSSDTYNP FPGVIDTAPS SRGYTGGFGT DLMLKDLGLA GDAAKSVRQP VYLGALAQQL YQTVSSKGDG KLDFSAVIKL YRKDGAA
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