Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4069 |
Symbol | |
ID | 8021757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 659392 |
End bp | 659889 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832850 |
Product | alkylhydroperoxidase like protein, AhpD family |
Protein accession | YP_002983990 |
Protein GI | 241665631 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATC TTTCCCCTCG CATGGATTAC TCGGAATTTG TCGATACTGC CGTCGGCGTG GCGCCGGCGC TGCAGGCGCT CGGTAAGGCG GTGGACGCCT CGGGGCTGGA AAAGCCGCTG ACCGAACTCA TCAAGCTGCG CGCCTCGCAA ATCAACGGCT GCGCGTTCTG CGTGCAATTC CACCTGAACC TGGCGCGCAA GCTGCGCGTG GCGCCGGCCA AGCTCGATCT GGTGGCGGTC TGGCGCGACA CGCCGGCGGT CTTCACGCCG CGCGAGCGCG CCGCGCTGGC CTGGACGGAA GCGCTGACCA CCCTGGCCCG CGCGGCCGAC CACGGGGTGG AGGATCACGA ATACGACGCC GTGCTCGAGC ATTTCTCCAG GACGGAAGTC GCCTTCCTCA CAGCCGCCGT CGCCAACATC CAGGCGTGGA ACCGTATTGC CGTCGCAATG CGCTTTGCGC CGCAGGTGCC GGCTGCCGTG ACCGCGGAGC AAGCATGA
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Protein sequence | MEDLSPRMDY SEFVDTAVGV APALQALGKA VDASGLEKPL TELIKLRASQ INGCAFCVQF HLNLARKLRV APAKLDLVAV WRDTPAVFTP RERAALAWTE ALTTLARAAD HGVEDHEYDA VLEHFSRTEV AFLTAAVANI QAWNRIAVAM RFAPQVPAAV TAEQA
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