Gene Rpic12D_4069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4069 
Symbol 
ID8021757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp659392 
End bp659889 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content67% 
IMG OID644832850 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_002983990 
Protein GI241665631 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATC TTTCCCCTCG CATGGATTAC TCGGAATTTG TCGATACTGC CGTCGGCGTG 
GCGCCGGCGC TGCAGGCGCT CGGTAAGGCG GTGGACGCCT CGGGGCTGGA AAAGCCGCTG
ACCGAACTCA TCAAGCTGCG CGCCTCGCAA ATCAACGGCT GCGCGTTCTG CGTGCAATTC
CACCTGAACC TGGCGCGCAA GCTGCGCGTG GCGCCGGCCA AGCTCGATCT GGTGGCGGTC
TGGCGCGACA CGCCGGCGGT CTTCACGCCG CGCGAGCGCG CCGCGCTGGC CTGGACGGAA
GCGCTGACCA CCCTGGCCCG CGCGGCCGAC CACGGGGTGG AGGATCACGA ATACGACGCC
GTGCTCGAGC ATTTCTCCAG GACGGAAGTC GCCTTCCTCA CAGCCGCCGT CGCCAACATC
CAGGCGTGGA ACCGTATTGC CGTCGCAATG CGCTTTGCGC CGCAGGTGCC GGCTGCCGTG
ACCGCGGAGC AAGCATGA
 
Protein sequence
MEDLSPRMDY SEFVDTAVGV APALQALGKA VDASGLEKPL TELIKLRASQ INGCAFCVQF 
HLNLARKLRV APAKLDLVAV WRDTPAVFTP RERAALAWTE ALTTLARAAD HGVEDHEYDA
VLEHFSRTEV AFLTAAVANI QAWNRIAVAM RFAPQVPAAV TAEQA