| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4067 |
|---|
| Symbol | |
|---|
| ID | 8021755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 658026 |
|---|
| End bp | 658685 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644832848 |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_002983988 |
|---|
| Protein GI | 241665629 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.690798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGTT GGTTCGGACA TCACCACAAA ATGTGGATTG AAAAGCATTT CATGATGGGT
CGCCACGGTC ATGGCGGACA CGGGTTCGGG CGTGGCATGG GCGGCCCCGG CGGCTATGGC
GAAGGTGACG ACGAAGGCGG CAGCCCCTGG CGCGGCCGCC GGCTCAGTTC AGCCGACCTG
CAACTGGTGC TGCTGGCGCT GCTCAAGGGC ACACCCCGCC ACGGCTATGA GTTGATCAAG
GCGGTGGAAG AGCATTCGCT CGGCTTCTAC ACACCGAGCC CGGGCATGGT GTACCCAGCG
CTGTCGTATC TGGAAGACCA CGGTTTCGCT TCCGTCACTG TCGAGGGCAA CAAGAAGCGC
TACGGCATCA CCCCCGAAGG CGAAACATGG CTGGCCGAGC GCCAGCACAG TGCCGATGCC
ATCCTCGCCC AACTGCGTGC CATGGGCGAG CGCGTCAAGC GCATGAACGA AGCCATGGCC
TTCGACCGCG AAACCGACAA CGCCGCCGAA TGGACGGACA CGGGCCACGA CCCGCTGCGC
ACCGCGCGCT GGCGCCTGAA GTTTGCCCTC ATGGAAAAAC GCTTCGCTTC GCGCGAAGAA
CAGCAACGCG TGGCAGACAT CCTGCTACGT GCCCTCAAGG AAATCACCGG CGAGCGGTAA
|
|---|
| Protein sequence | MRGWFGHHHK MWIEKHFMMG RHGHGGHGFG RGMGGPGGYG EGDDEGGSPW RGRRLSSADL
QLVLLALLKG TPRHGYELIK AVEEHSLGFY TPSPGMVYPA LSYLEDHGFA SVTVEGNKKR
YGITPEGETW LAERQHSADA ILAQLRAMGE RVKRMNEAMA FDRETDNAAE WTDTGHDPLR
TARWRLKFAL MEKRFASREE QQRVADILLR ALKEITGER
|
|---|
| |