| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4002 |
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| Symbol | |
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| ID | 8021690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 582863 |
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| End bp | 583798 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644832787 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002983927 |
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| Protein GI | 241665568 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.474244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCACC GCATCGCTGT GCTCATTTTT CCGGACTTCC AACTGCTCGA CGCTGCGGGG
CCGGTGGCGG CGTTTGAAGT CGCCAGCCGG TATCGGGACG ACCACTACGC GCTGCGCACG
GTTGCCGCGC AGGCCGGCCT TGTACGCAGT TCTTCCGGGG CCCGCTGGGA TGCCGACGCC
CTGCCCCCGG CCAGCCAGGT CGACACGCTG CTCATTGCCG GCGGCGACGG CGTGGATGCG
GCCATGGCGG ATGCACGCAC GCGCCGCTTC GTGCAGCGTT GCGCAGCCCG CGGGGCGCGC
GTCGCCAGCG TGTGTTCGGG CAGCTTGCTG CTGGCCGCCA CGGGCTTGCT GAACGGCCGA
CGCGCCACCA CCCACTGGAG CCGCAGCGAG CAGTTCGCGC GCGCGTTCCC GCAGGTGCAG
CTCGAACCGG ACCACATCTA CGTAAACGAC GGCCCCATCT GGACCAGCGC CGGCATCAGC
GCCGGCATCG ACCTGGCGCT CGCGCTCATC GCCGACGACC TGGGCGAGCG CCTGGCACGC
GCGGTGGCGC GGCAGTTGGT CGTGTACTAC CGCCGGCCGG GCGGACAGTC GCAGTTTTCA
GCGCTAAATG AGATGGATTC GGCACGCGGC CGCTTCAAGC CGCTGCTCGA CCACGTGCGG
CGCAACCTGG GCGCACCGCA CCGCGTGGGC GATCTGGCCG AGCACGCCTG CATGAGCCCG
CGCCATTTCG CCCGCGCATT CCAGGTCGAA ACCGGTCTCA CCCCTGCAAA GGCCGTGGAA
AAATTGCGCG TTGAGGCGGC CCGCGCCGCG TTGGAAAGCG GGGCCGTCTC CATGCAGCGG
GTGGCCACCG AGTGCGGATT TGGCGATACC GAGCGCATGC GCCGCAGTTT TCAGCGCTTG
CTGGGCGTGC CGCCGTCTTC GTTGCGCGCA CGGTAA
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| Protein sequence | MAHRIAVLIF PDFQLLDAAG PVAAFEVASR YRDDHYALRT VAAQAGLVRS SSGARWDADA
LPPASQVDTL LIAGGDGVDA AMADARTRRF VQRCAARGAR VASVCSGSLL LAATGLLNGR
RATTHWSRSE QFARAFPQVQ LEPDHIYVND GPIWTSAGIS AGIDLALALI ADDLGERLAR
AVARQLVVYY RRPGGQSQFS ALNEMDSARG RFKPLLDHVR RNLGAPHRVG DLAEHACMSP
RHFARAFQVE TGLTPAKAVE KLRVEAARAA LESGAVSMQR VATECGFGDT ERMRRSFQRL
LGVPPSSLRA R
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