Gene Rpic12D_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3909 
Symbol 
ID8021596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp485354 
End bp486151 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content64% 
IMG OID644832697 
ProductABC transporter related 
Protein accessionYP_002983838 
Protein GI241665479 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.804783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAC TCACCTCCAT TTCCAAGCGC TTTGGCGGCC TGTCGGTGCT GCAGGACGTC 
AACATTGAAG TGCCGCAAGG CACCATCTTC GGCTTGATCG GCCCGAACGG CGCCGGCAAG
ACGACCGTCT TCAACCTGAT CACCGGCCTG CTGGCACCCA CGGGCGGCTC GCTGACGTTC
AACGGCGAAA ATCTTGTCGG CAAGAAGCCG CACCAGATCA CGCAGATGGG CATCGCGCGC
ACGTTCCAGA ACATCCGCAT CTTCAAGGAG ATGACGCTGC TGGAGAACGT CGTGGTGGGC
ATGCACCGGC ATCTGGACTA CGGTGCACCG GGCCTGCTGC TGTCGCTGCC CAAGTACCGC
GCTGCCGAGC GCCGCGCGCG CGACCGTGCA CTGGAGCTGC TCTCGTGGGT CAAGCTCGAT
CACAAGGCGC ACGACATTGC CGACAACCTC TCGTACGGCG ACCAGCGCAA GCTCGAGCTC
GCGCGGGCGC TGGCCACCGA GCCCAAGCTG CTGTTGCTCG ACGAGCCCGT CGCTGGCATG
AACACCGGCG AGAAGGTCGA CCTGATGGCC GAGATCGAGA ACATCAAGGC GCGCGGCTAC
ACGATCTTCA TGATCGAGCA CGACATGCGC TTTGTGATGG GCCTGTGCGA GCGCATTGCG
GTGCTCAACT TCGGCCGCAT CATCGCCGAA GGGCCGCCGG AGGCCATTCG CAACAACCCG
CAAGTCATCG AAGCCTATCT CGGCCGGGAC GACGACGAGG CGGACGGTTC TGCTGCCGCA
GAGAAGGAGA CGGCATGA
 
Protein sequence
MLKLTSISKR FGGLSVLQDV NIEVPQGTIF GLIGPNGAGK TTVFNLITGL LAPTGGSLTF 
NGENLVGKKP HQITQMGIAR TFQNIRIFKE MTLLENVVVG MHRHLDYGAP GLLLSLPKYR
AAERRARDRA LELLSWVKLD HKAHDIADNL SYGDQRKLEL ARALATEPKL LLLDEPVAGM
NTGEKVDLMA EIENIKARGY TIFMIEHDMR FVMGLCERIA VLNFGRIIAE GPPEAIRNNP
QVIEAYLGRD DDEADGSAAA EKETA