Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3872 |
Symbol | prfC |
ID | 8021559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 443817 |
End bp | 445412 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644832660 |
Product | peptide chain release factor 3 |
Protein accession | YP_002983801 |
Protein GI | 241665442 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTACGC TGCAGCAGGA GATCCGGCGC CGCCGGACGT TCGCCATCAT TGCCCACCCG GATGCGGGTA AAACCACGCT GACCGAGAAA CTGCTGTGGT TCGGCGGCGC CATCCAGATG GCCGGCGCCG TGCGGGCGCG CAAGGCCAAC CGCCACGCCA CATCCGACTG GATGGAGATG GAAAAGCAGC GCGGTATCTC GGTGACGTCG TCGGTGATGC AGTTCCCGTA TCGGAACGAA GGTGGCGACT ACATCGTCAA CCTGCTCGAC ACCCCGGGCC ACGAAGACTT CTCGGAAGAC ACGTACCGCA CGCTCACGGC CGTCGACTCC GCCGTGATGG TGATCGACTC CGTCAACGGT GTGGAAGCGC AGACCATCAA GCTGCTCAAC GTCTGCCGCC TGCGCAGCAC GCCTATCCTC ACGTTCATCA ACAAGCTCGA CCGCGAAGGC CGCGCGCCCA TCGAATTGCT CGATGAAATC GAAAGCGTGC TGCAGATCCA GTGCGCCCCG ATGACGTGGC CGATCGGCAT GGGCAAGTCG TTCAAGGGCG TGTATCACCT GGTCAACGAC ACGGTGCAGC TGTTCGACCC GAACGCCGAC AGCGAGAAGG GCGCCACCGC CGGCCTGATT CAAGGCCTGG ACAACCCGGA GCTGGATCGC GTGCTGGGCT CGCAGGCCGA AGAACTGCGC ATCGACATCG AACTCGTGCG CGGCGCATCG CATACGTTCG ACAAAGAGGC GTTCCTGGCC GGCAAGCAGT GCCCGGTGTA CTTCGGCTCG GCGGTGAACA ACTTCGGTGT GCAGTCGTTG CTGGATGCGC TGGTCGACCA GTCGCCCGAG CCACTGGCGC GCCCCACCGA GACGCGCGAA GTCAAGCCGA TGGAAGAGAA GTTCACCGGC TTCGTCTTCA AGATCCAGGC CAACATGGAC CCGAAGCACC GTGACCGCAT CGCCTTTGTG CGTGTGTGCT CGGGCCGCTT CGAGCGCGGC ATGAAGCTGC TGCAGGTGTC CACAGGCAAG ACGGTCGCCA TCAACAACGC CATCACGTTC ATGGCGCAGG ACCGCAACAC CACGGAAGAG GCGTTCGCCG GCGACATCAT CGGCGTGCCC AACCACGGCA CGATCCGCCT TGGTGATGCC TTTACGGAAG GTGAGGCGCT CAAGTTCACG GGTATCCCGT CGTTTGCGCC GGAGTTCTTC CGTCGCGCGC GTCTGAACAA CCCGCTGCGC CTCAAACAGC TGCAGAAGGG TTTGCAGCAA CTGGCCGAAG AAGGCGCCAC GCAGATGTTC CGCCCGCTGG CCTCGAACGA CCTCGTGTTG GGCGCCGTCG GTATCCTGCA GTTCGACGTG GTTGCGCACC GCCTGGAGCA CGAATACGGC GTCGACGCCA TCTTCGAACC GCATGAGTGC TCCACGGCCC GCTGGCTGCG CGGCAAGCAG GAAGATATCG ACAAGCTGAT CGACAAGGCC GGCCACAACG TGGCGCTGGA CGGTGCGGGC GACTACGTGT ACCTGGCGCC GAGCCAAGTG AACCTGCGCC TGACGCAGGA GCGGTTTCCG GACATCCAGT TCATGGAAAC GCGGGAAATC GTTTAA
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Protein sequence | MSTLQQEIRR RRTFAIIAHP DAGKTTLTEK LLWFGGAIQM AGAVRARKAN RHATSDWMEM EKQRGISVTS SVMQFPYRNE GGDYIVNLLD TPGHEDFSED TYRTLTAVDS AVMVIDSVNG VEAQTIKLLN VCRLRSTPIL TFINKLDREG RAPIELLDEI ESVLQIQCAP MTWPIGMGKS FKGVYHLVND TVQLFDPNAD SEKGATAGLI QGLDNPELDR VLGSQAEELR IDIELVRGAS HTFDKEAFLA GKQCPVYFGS AVNNFGVQSL LDALVDQSPE PLARPTETRE VKPMEEKFTG FVFKIQANMD PKHRDRIAFV RVCSGRFERG MKLLQVSTGK TVAINNAITF MAQDRNTTEE AFAGDIIGVP NHGTIRLGDA FTEGEALKFT GIPSFAPEFF RRARLNNPLR LKQLQKGLQQ LAEEGATQMF RPLASNDLVL GAVGILQFDV VAHRLEHEYG VDAIFEPHEC STARWLRGKQ EDIDKLIDKA GHNVALDGAG DYVYLAPSQV NLRLTQERFP DIQFMETREI V
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