Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3866 |
Symbol | |
ID | 8021553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 438975 |
End bp | 439820 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832654 |
Product | malonate decarboxylase subunit beta |
Protein accession | YP_002983795 |
Protein GI | 241665436 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
TIGRFAM ID | [TIGR03133] malonate decarboxylase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGCA ACCCGATTGA ACGCGACAGC TTTATCGAAC GCGACGCGCG CCGACGTGCG ATTGCCCTGC TCGACCCCGG CACCTTCCGC GAGCTGCTCG ACCCATTCGA GCAATTGACC TCGCCGTGGC TGCCGCGCCA GGGCATCGTC ACGCAGGCCG ATGATGGCGT GGTGGTGGCC CGCGGGACGT TGGGCGGGCA ACCTGCGGTG GTGCTCGCCA TTGAAGGCGC CTTCCAGGGC GGCAGCATGG GCGAGGTGTC CGGCGCCAAG ATTGCCGGCG CGCTGGAGCT GGCGGCAGAA GACAACCGCA ATGGCATTCC CACACGCGTC GTCATCGTCT TCGAAACCGG CGGCGTGCGA CTGCAGGAAG CCAACTTGGG CCTGGCTGCC ATTGCCGAGA TCCACGCAGG CATCCGTGCG CTGCGCGAAT ACGGGCCGGT GATCGGCATC ACCGCGGGCG TGGTCGGCTG CTTTGGCGGC ATGAGCATCG CGGCGGGCCT GTGCAGCTAC CTGCTGATGA CGCGTGAGGC ACGCCTCGGC CTGAACGGCC CGCAGGTGAT CGAGCAGGAA GCCGGCATTG AAGAATACGA CTCGCGCGAT CGCCCCTTCA TCTGGAGCCT GACCGGCGGA GAGCAGCGCG CAGCCACCGG CTTGGCCGAT GTCTGCATCG AAGACGATTC CGTGGCCATC CGCGCACAGG TGATCGAGTG GCTGCGCGCC GGCGCGCCCA AGCACCAGCG CAGCGAGCAG ATCGACCACT ACCTCGCACA ACTCGCCGCC GTCGACACAT CACGCCAAGC CACGGCAGAA GATGTGCGCA CGCACTACGC AAAGGACGTC GCATGA
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Protein sequence | MSRNPIERDS FIERDARRRA IALLDPGTFR ELLDPFEQLT SPWLPRQGIV TQADDGVVVA RGTLGGQPAV VLAIEGAFQG GSMGEVSGAK IAGALELAAE DNRNGIPTRV VIVFETGGVR LQEANLGLAA IAEIHAGIRA LREYGPVIGI TAGVVGCFGG MSIAAGLCSY LLMTREARLG LNGPQVIEQE AGIEEYDSRD RPFIWSLTGG EQRAATGLAD VCIEDDSVAI RAQVIEWLRA GAPKHQRSEQ IDHYLAQLAA VDTSRQATAE DVRTHYAKDV A
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