Gene Rpic12D_3847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3847 
Symbol 
ID8021534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp417444 
End bp417836 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content59% 
IMG OID644832637 
Product4-oxalocrotonate tautomerase 
Protein accessionYP_002983778 
Protein GI241665419 
COG category[R] General function prediction only 
COG ID[COG1942] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 
TIGRFAM ID[TIGR00013] 4-oxalocrotonate tautomerase family enzyme 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.544573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCC TCAACGTCAA AGTCAGTGCC CAGCGTTCTG CGCAGATGAC GCAGAAGATT 
GCCGCTACGC TGCTGGAACT CACGTCCCGC ATTCTTGGCA AAGACCCGAA GGTGACGGCC
ATCGCCATCG ACTACGTCGA CCCGGCGGAC TGGATCGTCG GCGGGCAGAC GCTGGCAGCG
CAGGGCAAGA ACAGCGTCTA TTTCGACATC AAGGTGACGG ACGAAACCAA CACCAAGGCG
GAAAAGGCGC AGTACATCGC CGAGGCGTTC GAGGCCTTTG CCGAATTGCT CGGCAACCTG
CATGAAGAGA GCTATATCTA CGTGCAGGAC GTTCGCGCTG CAGCCTATGG CTATGGCGGC
AAGACGCAGG AGTACCGCTA CCAGCACGCT TGA
 
Protein sequence
MPILNVKVSA QRSAQMTQKI AATLLELTSR ILGKDPKVTA IAIDYVDPAD WIVGGQTLAA 
QGKNSVYFDI KVTDETNTKA EKAQYIAEAF EAFAELLGNL HEESYIYVQD VRAAAYGYGG
KTQEYRYQHA