Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3841 |
Symbol | |
ID | 8021528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 412601 |
End bp | 413641 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832631 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_002983772 |
Protein GI | 241665413 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.455211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGG GCGCCGCAGC CGTAACCGTC GATGATGTTG CCGCGCATGC GGGCGTGTCC ATCAAGACCG TCTCGCGCGT GTTGAATCAC GAGCCGAACA TCAGCGAAAA GACGCGCGCC AAGGTGGTCG AGGCGATGCA GGCGCTCGAC TACCGGCCCA ACCCCGCCGC CCGCCGCCTG GCGAGCAAGC GCGCCGACAT CATCGCGCTG GTCTACGACA ACCCCTCTGA CAACTACATC GTCAATATTC AGCACGGCGC ACTGGAAGCG TGCCAGGCGC TCGACTACAG CCTGCTGCTC ACGCCTTGCC ATTACCGCGA TCCGCACCTT GCTGAGCAGA TCATCCAGAG CGCGCGCCAG CGTGCCTTGG CCGGCATCAT CCTTACGCCG CCTGTGTCGG ACGTGCCGTC ATTGATTCAC GCGTTGGATG AGGCCGGCAT CGACTACGTG CGTCTTGCGC CTGCGGATCG GGAGCACAAG GGCTTGTCGG TCAACACAGA AGACCGCGCT GCCGCGCGCG ACATGACGTT GCATCTGATC GGTCTGGGCC ACCGCCGCAT CGGCTTTGTG GTCTGCGACC CCGACCACGG CGCGGCGTAC CAGCGCGTGT TCGGCTATCG CGATGCCATG GCGCAGGCCG GTATCGACGT CGATGAACAC CTGGTGGAGC AGGGCGAGCA CTCCTTCGAG TCAGGCGTGG CGTGCGCCGA ACGATTGCTC TCCCGCGAAC CGCGCCCGAC CGCCATCTTT GCCGGCAACG ACGACATGGC CGCTGGCGTA CTGCGCGTAG CGCAGGCGCG TGGCATCAAG GTGCCGGAAG AACTCTCGAT CTGCGGCTAC GACGACACAC CACTTTCGCG CCAGCTCTGG CCTGCGCTGA CCACGGTGCG CCAGCCGATC CAGGCCATGG CGCATGCAGC GGTCGAGCAG CTGGTGGCGA TTCATCGTCC GCATCTGCCG GGACTGAAGC CCCACTCGGT GCACGAGAAT CTGCAATATG AACTCGTGAT CCGGGATTCG ACTTGCCAGC CGGCACGTTG A
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Protein sequence | MKRGAAAVTV DDVAAHAGVS IKTVSRVLNH EPNISEKTRA KVVEAMQALD YRPNPAARRL ASKRADIIAL VYDNPSDNYI VNIQHGALEA CQALDYSLLL TPCHYRDPHL AEQIIQSARQ RALAGIILTP PVSDVPSLIH ALDEAGIDYV RLAPADREHK GLSVNTEDRA AARDMTLHLI GLGHRRIGFV VCDPDHGAAY QRVFGYRDAM AQAGIDVDEH LVEQGEHSFE SGVACAERLL SREPRPTAIF AGNDDMAAGV LRVAQARGIK VPEELSICGY DDTPLSRQLW PALTTVRQPI QAMAHAAVEQ LVAIHRPHLP GLKPHSVHEN LQYELVIRDS TCQPAR
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