Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3745 |
Symbol | |
ID | 8021432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 303196 |
End bp | 304266 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644832535 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_002983676 |
Protein GI | 241665317 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAT GGCCCGATGC CCGCGTGCTG AAGTTGTTCA ACATCGAAGT GCCCATCGTG CTGGGACCGA TGGCCGGCGC GGCCGGTGTC GAACTGGCCA TTGCCGTGGC GCGGGCCGGT GGGCTCGGTT CGTTGCCGTG CGCCATGCTG AACGCGGAGC AGATTCGCCA GCAGGTCGAG CAGTTTCGGG CAGCCGTGCG CGCCCCCGTC AACCTGAACT TCTTCTGCCA TACGCCGCCG CAGCCCGATG CAGAGCGCGA GGCCAAATGG CGCGCCCACC TCGCACCGTA TTACGCCGAG TTCGGGATCG ACCCGGCCAC ACAGGCGCCG ACTGCCAACC GCGCGCCGTT CGACGAGACC ACCTGTGCGC TGGTGGAAGA ACTGAAGCCC GAAGTCGTGA GTTTCCACTT CGGCCTGCCG ACTCCCGAAT TGCAGGCGCG GGTGAAGGCG ACCGGCGCAA AGATCCTCTC AGCCGCTACG ACCGTGGAGG AAGCCCGTTG GCTGGAAGCG CGTGGAGTGG ACGCCATCAT CGCCATGGGC AACGAAGCCG GCGGGCACCG CGGCATGTTC CTCGCCAAGA CGATCGAATC GCAGGTGGGC ACCTTTGCGC TCGTGCCGCA GGTCGCCGAC GCCGTGAAGG TGCCGATCAT TGCCGCCGGC GGTATTGGCG ACGCGCGCGG CGTGGTGGCC GCGTTCGCGC TGGGCGCATC GGCTGCGCAG ATCGGCACGG CTTACCTGCT GTCGCCCGAG GCAAAGACGT CGTCCATCCA CCGTGCTGCA CTGAAGCGGG CGACCGATGC GGATACAGCC CTCACCAATC TCTTTAGCGG GCGGCCGGCG CGCGGCATCG TGAACCGGCT GATGCGCGAG ATCGGGCCGA TGAGCCCGCT TGCGCCGGCT TTCCCTACCG CGGGTGGGGC GCTGGCGCCC TTGCGTGCCA AGACCGAACC CGCGGGCTCG GGCGATTTCA TCAATCTGTG GTCCGGGCAG GCAGGCCGAT TCGCCACCGA AGACTCCGCC GAGGCCATCA CGCGGCGCAT CGCCACGCAG GCGCTGGAAC GGCTTACCTG A
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Protein sequence | MSAWPDARVL KLFNIEVPIV LGPMAGAAGV ELAIAVARAG GLGSLPCAML NAEQIRQQVE QFRAAVRAPV NLNFFCHTPP QPDAEREAKW RAHLAPYYAE FGIDPATQAP TANRAPFDET TCALVEELKP EVVSFHFGLP TPELQARVKA TGAKILSAAT TVEEARWLEA RGVDAIIAMG NEAGGHRGMF LAKTIESQVG TFALVPQVAD AVKVPIIAAG GIGDARGVVA AFALGASAAQ IGTAYLLSPE AKTSSIHRAA LKRATDADTA LTNLFSGRPA RGIVNRLMRE IGPMSPLAPA FPTAGGALAP LRAKTEPAGS GDFINLWSGQ AGRFATEDSA EAITRRIATQ ALERLT
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