Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3740 |
Symbol | |
ID | 8021427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 297851 |
End bp | 298855 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832530 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_002983671 |
Protein GI | 241665312 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCTCC CGCCGATCCT GAAAAACCGC CTGTCCGTGC CCGTGGTGGG CTCGCCGCTG TTCATCATTT CCAACCCTGA CCTCGTGATC GCGCAGTGCA AGGCGGGCGT GGTCGGCTCG TTCCCGGCGC TGAATGCGCG CCCGGCAGAG CTGCTGGAGA CCTGGCTGCA GCGCATTACC ACGGAGCTGG CCGAATACGA CGCGCAGCAC CCCGACAAGC CGTCGGCACC GTTTGCCGTC AACCAGATCG TGCACAAGTC GAACGACCGC CTGGAGCACG ACCTGGAGCT GTGCGTGAAG TACAAGGTGC CCATCGTCAT CACCTCGCTG GGCGCGCGTG AAGACGTGAA CCAGGCGGTG CACAGCTACG GCGGCATCGT GCTGCACGAT GTCATCAACA ACAAATTTGC CAAGAAGGCG ATCGAGAAAG GCGCGGATGG CCTGATCGCG GTGGCGGCGG GCGCGGGCGG CCATGCGGGC ACGACCTCGC CGTTTGCGCT GATCCACGAA ATTCGCGAAT GGTTTGACGG CCCGCTGCTG CTGTCGGGCG CCATCGCCAA CGGCAATGCG ATCCTGGCAG CATTGGCAGC GGGTGCGGAC CTGGCCTACG TCGGATCCGC ATTCATCGCC ACCGAAGAAG CCAACGCAAT CGAGGGCTAC AAGCAGGCGA TCGTGGAAAG CACCGCCAGC GATATCGTCT ACACGAACCT GTTCACCGGC GTGCACGGCA ACTACCTGCG CAAGAGCATC GAAGGCGCCG GCCTGGACCC GGACGCGCTT CCGGAATCCG ACCCGAGCAA GATGAACTTC GGCTCGGGCG GCGGCGCCAA GGCCAAGGCA TGGAAAGACA TCTGGGGCGC CGGCCAGGGC GTGGGCGCGG TCAAGCGCGT GGTGCCGGCA GCGGAGCTCG TCAAGCGCTT TGCTGAAGAG TTTGAAGTGG CACGCCGCCG CCTGGGCAAT ATCGAGGCGC TGCGCGCCCC GGCAGGCGAT AAGGCAACCG CCTGA
|
Protein sequence | MSLPPILKNR LSVPVVGSPL FIISNPDLVI AQCKAGVVGS FPALNARPAE LLETWLQRIT TELAEYDAQH PDKPSAPFAV NQIVHKSNDR LEHDLELCVK YKVPIVITSL GAREDVNQAV HSYGGIVLHD VINNKFAKKA IEKGADGLIA VAAGAGGHAG TTSPFALIHE IREWFDGPLL LSGAIANGNA ILAALAAGAD LAYVGSAFIA TEEANAIEGY KQAIVESTAS DIVYTNLFTG VHGNYLRKSI EGAGLDPDAL PESDPSKMNF GSGGGAKAKA WKDIWGAGQG VGAVKRVVPA AELVKRFAEE FEVARRRLGN IEALRAPAGD KATA
|
| |