Gene Rpic12D_3721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3721 
Symbol 
ID8021408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp275636 
End bp275926 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content61% 
IMG OID644832511 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_002983652 
Protein GI241665293 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00112888 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.513312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAT ACAAGGAATT GATTGCCCAA AAGGCCAAGT TGGAAGAACA GATCGAAACC 
GCTCGCGCCA AAGAGCTGGA AACCGTGATC CAGCAAGTGC GCCAGACGGT TGCCGAATAT
GGCCTGACGG TTGAAGACCT GGGCTTGGCG CCGCGTCGCG GTCGCCGTGC CGGTGCCAAG
GCGCCGGTCC CTCCCAAGTA TCGCGATCCG AAGACAGGTG CAACATGGTC GGGTCGCGGC
CGTGCGCCGG CCTGGATCGG CAAGAATCGC GACAAGTTCC TGATCGCCTG A
 
Protein sequence
MATYKELIAQ KAKLEEQIET ARAKELETVI QQVRQTVAEY GLTVEDLGLA PRRGRRAGAK 
APVPPKYRDP KTGATWSGRG RAPAWIGKNR DKFLIA