| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3682 |
|---|
| Symbol | |
|---|
| ID | 8021369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 238115 |
|---|
| End bp | 238903 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644832472 |
|---|
| Product | flagellar biosynthetic protein FliR |
|---|
| Protein accession | YP_002983613 |
|---|
| Protein GI | 241665254 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0756404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.879793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAGT TCACCGCCGC CCAGCTCAAC GGCTGGATTG CCATGTACTG GTGGCCGCTG
GTACGCGTGC TGGCGTTCAT CGCCATGGCG CCGCCGTTTG CCAACACCGA AGTGCCGACC
TCGATCAAGA TCGCCCTGGG CGTGATCATC ACGGTGGCGC TGGCGCCCAT GCTGCCTGTG
CCGGTAGGCG TTTCGGTGGG TTCCTATGAA GGGCTGTGGA TCACGCTGCT GCAGGCGGTG
ATCGGGCTGT CGCTGGGCTT CTGCGTGCAG CTCGTGTTCT CGGCCATCAG CGGCGCGGGT
GAAGTGATGT CGGTGCAGAT GGGCCTCGGT TTCGCCTCGC TGCTCGACCC GCAGCAGACA
GAAAGCAGCA TGCTGCTGGG CCGCTTCATC AGCCTCACGG CCATCACCGC ATTCATCGCC
GGCGACGGTC ACCTCGTGTT GTTGCACGCG CTGTTCGACA GCTTCACCGC CCTGCCCGTC
TCAGCCGCGC CCCTGGCCAA TCCCGGCTGG CAGACGCTGG CCGGCGGCGG CACGATGGTC
TTTGCGCTGG CCGTGCGGAT CGCCCTGCCG ATCATTGCCA TCATGCTGGT CGTCAACCTC
GGGTTTGCGG TGCTCTCACG CACCGCGCAG GCGCTGAACC CGTTTGCCGT GGGCATTGCC
GCCACGCTGG TGGTGGGTCT GATGCTGGTC ATGGTGATGA TGACCTCGCT TGCACCCGTG
GTGGAGCGCT CCGTCATGGA TGCGCTGGAA CTCGGTGGGC GGGCATTCGG GCAGTTCGGG
GCGCAATGA
|
|---|
| Protein sequence | MIQFTAAQLN GWIAMYWWPL VRVLAFIAMA PPFANTEVPT SIKIALGVII TVALAPMLPV
PVGVSVGSYE GLWITLLQAV IGLSLGFCVQ LVFSAISGAG EVMSVQMGLG FASLLDPQQT
ESSMLLGRFI SLTAITAFIA GDGHLVLLHA LFDSFTALPV SAAPLANPGW QTLAGGGTMV
FALAVRIALP IIAIMLVVNL GFAVLSRTAQ ALNPFAVGIA ATLVVGLMLV MVMMTSLAPV
VERSVMDALE LGGRAFGQFG AQ
|
|---|
| |