Gene Rpic12D_3679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3679 
Symbol 
ID8021366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp236673 
End bp237056 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content70% 
IMG OID644832469 
Productflagellar biosynthesis protein FliO 
Protein accessionYP_002983610 
Protein GI241665251 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATG CAGTTGATTG GGCCCGCACC TTTGGCGGGC TGTTTGTAGT CCTGGCGATG 
ATCGTCGCGG CCGGCTGGCT GCTGCGCCGC CTGCAGCAGC GCGCGGGCAT GGGCCCCGGC
GGACGCCGCA GCCAGGTGAT CACCGTGGTC GCGCAGCAGA TGCTGGGCGC TCGCGAGAAA
GTGGTCGTCG TGGACGTGGA AGGCACGTGG CTCGTGCTGG GCGTCACGCA GCAGCACGTG
CAGACGCTGC ACACGCTGCC GCGCCCGGCC GATGCGGCGC CCACCGCGGG CAGCGACGGT
ACGCTGGCGA CAGGCAAGCC GCCCCGCTTT GCCGATGCGC TGTCCGTCCA ACTCAAGCGC
CACCTGACGG GGAAATCGGA ATGA
 
Protein sequence
MNHAVDWART FGGLFVVLAM IVAAGWLLRR LQQRAGMGPG GRRSQVITVV AQQMLGAREK 
VVVVDVEGTW LVLGVTQQHV QTLHTLPRPA DAAPTAGSDG TLATGKPPRF ADALSVQLKR
HLTGKSE