Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3678 |
Symbol | |
ID | 8021365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 236161 |
End bp | 236613 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832468 |
Product | flagellar motor switch protein FliN |
Protein accession | YP_002983609 |
Protein GI | 241665250 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTG AACCGACCAT GAACCCCGGA GCCAGCGCCG ACGACATCGA CGTCGAGATG ACGATGGAAG AGGCCATGGC CCTGGAAGCG GCGCAGCGTG CTGCGGCCAA CCCGCCGGCT GCCACGCCCG CCGCCGAATC GAGCCCGGTG TTCAAGCCCC TGACCGCCGA CGGCCTGGGC GGTGCCCAGC GCAACGACAT CGACATGATC CTGGACATCC CCGTGCAGTT GACGGTGGAG CTGGGGCGTA CCAAGGTGCC CATCAAGAAC CTGCTGCAGC TCGCGCAGGG TTCGGTGGTG GAACTCGACG CGCTGGCCGG TGAGCCGATG GACGTCCTCG TCAACGGCTA CCTGATTGCC CAAGGTGAAG TGGTGGTGGT CAACGAGAAG TTCGGCATCC GCCTGACCGA CATCATCACG CCGTCCGAAC GCATCCGTAA GCTGAACCGC TAA
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Protein sequence | MTTEPTMNPG ASADDIDVEM TMEEAMALEA AQRAAANPPA ATPAAESSPV FKPLTADGLG GAQRNDIDMI LDIPVQLTVE LGRTKVPIKN LLQLAQGSVV ELDALAGEPM DVLVNGYLIA QGEVVVVNEK FGIRLTDIIT PSERIRKLNR
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