Gene Rpic12D_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3678 
Symbol 
ID8021365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp236161 
End bp236613 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content65% 
IMG OID644832468 
Productflagellar motor switch protein FliN 
Protein accessionYP_002983609 
Protein GI241665250 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTG AACCGACCAT GAACCCCGGA GCCAGCGCCG ACGACATCGA CGTCGAGATG 
ACGATGGAAG AGGCCATGGC CCTGGAAGCG GCGCAGCGTG CTGCGGCCAA CCCGCCGGCT
GCCACGCCCG CCGCCGAATC GAGCCCGGTG TTCAAGCCCC TGACCGCCGA CGGCCTGGGC
GGTGCCCAGC GCAACGACAT CGACATGATC CTGGACATCC CCGTGCAGTT GACGGTGGAG
CTGGGGCGTA CCAAGGTGCC CATCAAGAAC CTGCTGCAGC TCGCGCAGGG TTCGGTGGTG
GAACTCGACG CGCTGGCCGG TGAGCCGATG GACGTCCTCG TCAACGGCTA CCTGATTGCC
CAAGGTGAAG TGGTGGTGGT CAACGAGAAG TTCGGCATCC GCCTGACCGA CATCATCACG
CCGTCCGAAC GCATCCGTAA GCTGAACCGC TAA
 
Protein sequence
MTTEPTMNPG ASADDIDVEM TMEEAMALEA AQRAAANPPA ATPAAESSPV FKPLTADGLG 
GAQRNDIDMI LDIPVQLTVE LGRTKVPIKN LLQLAQGSVV ELDALAGEPM DVLVNGYLIA
QGEVVVVNEK FGIRLTDIIT PSERIRKLNR