Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3614 |
Symbol | |
ID | 8021301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 171722 |
End bp | 173440 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644832405 |
Product | hypothetical protein |
Protein accession | YP_002983546 |
Protein GI | 241665187 |
COG category | [S] Function unknown |
COG ID | [COG5298] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.746292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACAT TGCTTGGTAA GTTTCTCTGC GTGCTGGTGT TTGCTGGCAG CCTGCTTGGC GTCTCGGTGG GCGGAACGGC GCAGACTTCT GCATGCACCA TCGGTATCGG ACCTGTATGC GTGACGGTGG GTGCAACGGC ATCGGCTCAA ACCACGCCAG CCAAGATGCT GGTGCTGTAC GACGCGCCGC CCAATGACCA GTACACCAAT CTGGGCAAGG CGTACGCCAT CATGCTGTAC AACCTGCTCG CGCACTTCAA CACGACGATC ACGCTGCTGC CCGTGCAGAA CTACACGGCA GGCATGACCG AGCAGTATGC CGCCACGTTC TACATGGGGA GTTACTACAA CAACCCGATC CCGGCGGCTT TCCTGTCGGA CGTGACGACC ACGCAGAAGA CCGTGGTCTG GTTCAAGTAC AACCTGTGGG AACTGGCCTG GAATACGGCG TATCCGTTCA CTTCGCGCTA CGGCATCAAC TTTGTCGGCC TGCGGGGCCT GAACGCGGCA CCTTCGGCAA GCGCGCCGAA TCCGGGATTC TTCGACACGG TGTCGTACAA GAACCTGACG ATGACCAAGT ACTACGCCTA CAACGCCACG ACCGGTGCCA TCAGCGCGGA TCCGGATATC GGCGTGACCT CGGTGGCGGA CGCCACCAAG GCGACGAGCC TGGTGACCAT CACCAACTCG GTCACCCAGG AGACCGCACC TTATGTCATG CGCTCCGGCA ACTTCTGGTA CTTCGCCGAC ATGCCGTTCT CCTATATCGG CCCACGCGAC CGATACCTGG CCATGTGCGA CCTGCTGCAC GACATTCTCG GCACGAACCA GGCGACCCTG CACCGTGCCA TGGTCCGGCT GGAAGACGTG AACGCCACCA CCACCGTGTC TTCCATGAAG ACGCTCACGG ATTACCTGTA CAGCAAGAAG ATCCCGTTCT CCATTGCGAC CATTCCGCTG TATACCGATC CGAATGGTGT GTACAACGGC GGCGTGGCGC AGACCATCCA CCTGGTCAAT GCAACGGGTT TGAAGCAGGC CCTGAACTAT GCCCAGAATC GTGGCGGCCG GGTGCTCATG CACGGTTACA CGCACCAGTA CAGCAACATC CCGAACCTCA TCAACGCGGT CAGCGCGAAT GACTTCGAGT TCTGGCTCGC CACGGAGAAC CGGCCGGTGA ATGAGGATTC GACGCAATGG GCGGCAGGGC GGCTCTCCGC GGGGCTGCTG GAATTCCAGC TCAACGGCTA CTTCCCGTTT GCCTGGGAAG CGCCTCACTA CCAGTCGTCC CCGCTATCCA TCAAGGCGGT GCCGCAGTAT TTCAAGACGA CCTATCAGCG CGTGGTGTAC TACACGTCGG ACAACCCGCA GACGCTGAAC TCGACCACGG CCGGGCATGA CTTCTCGGTG GGCCAGTTCT TCCCCTACAT CATTCAGAAG GACTACTACA ACCAGCGCGT GCTGCCTGAA AACCTCGGCA ACGTGGAATA CAACATCTGC AATATCGATC CGTCGTCCTG CCTGACCTAC ACGGCGCAGG ACATCCTGAC CAACGCGAAC TACGCGCTGG CCGTGCGCGA TGGATTTGCG TCGTTCTTCT TCCACCCGTT CTGGCTGGAG CCGGATCTTG GCACGCCAGG CTTTACCGAC TTCCAGACCA TCATCAGCGG TATCACCAGC CTTGGGTTCA CCTGGGCCGA CGCCAGCAAG GTGCAGTAG
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Protein sequence | MKTLLGKFLC VLVFAGSLLG VSVGGTAQTS ACTIGIGPVC VTVGATASAQ TTPAKMLVLY DAPPNDQYTN LGKAYAIMLY NLLAHFNTTI TLLPVQNYTA GMTEQYAATF YMGSYYNNPI PAAFLSDVTT TQKTVVWFKY NLWELAWNTA YPFTSRYGIN FVGLRGLNAA PSASAPNPGF FDTVSYKNLT MTKYYAYNAT TGAISADPDI GVTSVADATK ATSLVTITNS VTQETAPYVM RSGNFWYFAD MPFSYIGPRD RYLAMCDLLH DILGTNQATL HRAMVRLEDV NATTTVSSMK TLTDYLYSKK IPFSIATIPL YTDPNGVYNG GVAQTIHLVN ATGLKQALNY AQNRGGRVLM HGYTHQYSNI PNLINAVSAN DFEFWLATEN RPVNEDSTQW AAGRLSAGLL EFQLNGYFPF AWEAPHYQSS PLSIKAVPQY FKTTYQRVVY YTSDNPQTLN STTAGHDFSV GQFFPYIIQK DYYNQRVLPE NLGNVEYNIC NIDPSSCLTY TAQDILTNAN YALAVRDGFA SFFFHPFWLE PDLGTPGFTD FQTIISGITS LGFTWADASK VQ
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