Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3593 |
Symbol | |
ID | 8021280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 144929 |
End bp | 146473 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644832384 |
Product | nitrate reductase, beta subunit |
Protein accession | YP_002983525 |
Protein GI | 241665166 |
COG category | [C] Energy production and conversion |
COG ID | [COG1140] Nitrate reductase beta subunit |
TIGRFAM ID | [TIGR01660] nitrate reductase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.090244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.177223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCC GTGCCCAGGT GGCCATGGTC CTGAATCTGG ACAAGTGCAT TGGCTGCCAT ACCTGCTCCG TGACGTGCAA GAACGTCTGG ACCTCGCGTG ACGGCGTGGA ATACGCCTGG TTCAACAACG TCGAGACCAA ACCCGGCGTC GGCTACCCCA AGCAATGGGA GAACCAGGAC AAGTGGCAAG GCGGCTGGCA ACGCCACGCC GACGGCAAGC TCACCCCGCG CCAGGGCGGA AAGCTGAAGA TCCTCGCCAA CCTGTTCGCC AACCCGAACC TGCCGCAGAT CGACGACTAC TACGAGCCCT TCACCTACGA CTACGCGCGC CTGCAGAACG CGCCGCTGTC GCAGACGCCG CCCACCGCGC GCCCGGTCTC GGCCATCACC GGCAAGACCA TGGAGAAGAT CGAGTGGGGT CCGAACTGGG AGGACGACCT GGGCGGCGAG TTCGAATCGC GCAGCCGTGA CCAGCTCTTT GAAGACATCC AGAAGGAGAT GTACTCGACC TTCGAGAACA CCTTCATGAT GTATCTGCCG CGCCTGTGCG AGCACTGCCT GAACCCGACC TGCGTGGCAT CGTGCCCGTC GGGCTCGGTC TACAAGCGCG AGGAGGACGG CATCGTGCTG GTCGACCAGG ACAAGTGCCG CGGCTGGCGC ATGTGCGTGT CGGGCTGCCC GTACAAGAAG ATCTACTTCA ACTGGCAGAG TGGCAAGGCC GAGAAGTGCA CCTTCTGCTT CCCGCGCATC GAAAGCGGCC AACCGACCGT GTGCTCGGAG ACCTGCGTGG GCCGCATCCG CTACCTCGGC GTGATGCTGT ACGACGCGGA TCGCATTGAA GCCGCCGCCA GCGTGGAAGA CACGAAGGAC CTCTACAACG CGCAGCTCGA CGTGTTCCTT GACCCCCACG ACCCCGCCAT CCAGGCAGAG GCGCTGCGTC AGGGCATCCC GCAAAGCTGG ATCGACTCGG CCGTGAAATC GCCGGTCTAC AAGATGGCCT GCGACTGGAA GGTGGCCTTC CCGCTGCACC CTGAGTACCG CACGCTGCCG ATGGTCTGGT ACATCCCGCC GCTGTCGCCG ATCCAGTCGG CTGCGGAATC CGGCGTGATG GGCATGGACG GGATGATTCC CGATGTGAAG AGCCTGCGCA TTCCGGTGCG CTACCTCGCC AACCTGCTGG CTGCCGGTGA CGAGGTGCCT GTTGTGAGCG CGCTGGAACG CATGCTGGCC ATGCGCGCCT ACAAGCGCGC ACAGACCGTG CATGGCGTGC AGGATCTCGA CGTGCTCCAT CGCGTCGGCC TCACCCCCAC GCAGGTGGAG GACATGTACC AGATCATGGC CATCGCCAAC TACGAGGACC GCTTCGTCAT CCCCGCCTCG CACAAGGAGA TGGCGCAGGA CAGCTTCGAT GAAAAAGGCG CGTGCGGCTT CAGCTTCGGC AACGGCTGCT CGGGCGGCGT ATCCGAAGGC ACGTTCTTCG GGCGCAAGAA GGCCAGCGTA TCGACCATCA GCATGCCGGT CTCGCGCAAG AAGAGCGCAG CCTGA
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Protein sequence | MKIRAQVAMV LNLDKCIGCH TCSVTCKNVW TSRDGVEYAW FNNVETKPGV GYPKQWENQD KWQGGWQRHA DGKLTPRQGG KLKILANLFA NPNLPQIDDY YEPFTYDYAR LQNAPLSQTP PTARPVSAIT GKTMEKIEWG PNWEDDLGGE FESRSRDQLF EDIQKEMYST FENTFMMYLP RLCEHCLNPT CVASCPSGSV YKREEDGIVL VDQDKCRGWR MCVSGCPYKK IYFNWQSGKA EKCTFCFPRI ESGQPTVCSE TCVGRIRYLG VMLYDADRIE AAASVEDTKD LYNAQLDVFL DPHDPAIQAE ALRQGIPQSW IDSAVKSPVY KMACDWKVAF PLHPEYRTLP MVWYIPPLSP IQSAAESGVM GMDGMIPDVK SLRIPVRYLA NLLAAGDEVP VVSALERMLA MRAYKRAQTV HGVQDLDVLH RVGLTPTQVE DMYQIMAIAN YEDRFVIPAS HKEMAQDSFD EKGACGFSFG NGCSGGVSEG TFFGRKKASV STISMPVSRK KSAA
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