Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3586 |
Symbol | |
ID | 8021273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 134003 |
End bp | 134887 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832377 |
Product | peptidase U32 |
Protein accession | YP_002983518 |
Protein GI | 241665159 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.838786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTACG AGATTTCGCT TGGTCCGCTG CTGTACTACT GGCCGCGGTT ACAGACGTTC GACTTCTACG CAGAGGTCGC GGCCAGCCCT GTCGACATCG TCTATGTGGG CGAGACGGTC TGCAGCCGCC GCCACGAGCT GCGGGCGGAC GACTGGCTCG ATATCGCGGC CATGCTGCGC GAGGCCGGCA AGTCGGTGGT GCTATCGACC CGGACGCTGA TTGAAACCAG TGCCGAGGCG CAGGCGTTGC GCAAGCAATG TCAGCAGGAC GACTGGCTGG TGGAGGCCGG CGAGCTGGGT GCCGTCAGGC TGCTTGGCGG CCGCCCGTTC GTGGCCGGGC CGCACTGCAA CGCTTACCAC GGCGCCACGC TTGCCTGGCT GGCTGGGCTG GGAGCGATAC GCGCGGTCAT GCCGCTGGAA ATGAGCCAGG CCACGCTGGC TGAGCTGATG CGCGAAAAGC CCGACGCACT GGAAATTGAA GCGATGGTGT GGGGCCGGTT GCCTTTGGCC TTCTCGGCGC GCTGCTTTAC GGCGCGGCAT TTCCGTCTCA ACAAGGACGA TTGCGGCTTC CGCTGTATCG AGCACCCCGA CGGTCTTGCC GTGCGCACGC GCGAGGGGCA GGAGTTTCTC GCCATCAACG GTATCCAGAC GCAATCGGGG CAATGCCTCG ACATGCTCGA CCAGGCGCCC GCGCTGTCGG CGCTCGGCGT GAAAGTCCTG CGCGTGAGTC CGCAGTCGCG CGGCACACTC GACGCGGTGG CCGCGCTGGA TGCGCAGCGC CGTGGCGAGC CCGCGCCCGC GGTGCAGCCG CCCGAAGGCA TCGGCCGCTG CAACGGCTAC TGGCATGGCC GATCCGGCAT CGACTGGCTG GAGACCCCGC GATGA
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Protein sequence | MSYEISLGPL LYYWPRLQTF DFYAEVAASP VDIVYVGETV CSRRHELRAD DWLDIAAMLR EAGKSVVLST RTLIETSAEA QALRKQCQQD DWLVEAGELG AVRLLGGRPF VAGPHCNAYH GATLAWLAGL GAIRAVMPLE MSQATLAELM REKPDALEIE AMVWGRLPLA FSARCFTARH FRLNKDDCGF RCIEHPDGLA VRTREGQEFL AINGIQTQSG QCLDMLDQAP ALSALGVKVL RVSPQSRGTL DAVAALDAQR RGEPAPAVQP PEGIGRCNGY WHGRSGIDWL ETPR
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