Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3577 |
Symbol | |
ID | 8021264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 125426 |
End bp | 126787 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832368 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_002983509 |
Protein GI | 241665150 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01513] putative nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.924497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.771098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCT CTCCCATCTG CACGTCGCCG CTCCTCACCG ACCTGTATGA ACTCACCATG ATGCAGGCGT ATCGGGATGC CGGCATGGAC GGTATCGCGA GCTTCGAATG CTTTGTCCGC AAGCTCCCGC CCGGGCGGAA CTTCCTCATG GCGGCGGGGC TGGAGCAGGT CCTGGATTTC CTGGCCAGCC TGCGCTTCAG TGAGGACGAG GTGGCATCGC TCGCAGCGCT CGGGCGGTTC GACGACGCGT TCCTGCAGTC GCTGCTCGAC CTGCGCTTCA CGGGCGATGT GCATGCCATG CCGGAGGGCA CGCTCTTCTT TCCGGACGAG CCGATCCTGC GCATCGTCGC GCCGCTGCGC GAGGCACAAC TGGTGGAGAG CCGCGTCATG AACCTGCTCC ATTACGAAAC GCTCGTCGCC AGCAAGGCAG CGCGCGTTGC GCTCGCCGCG CAGGGACGGC TGCTGGTGGA CTTCGGTCTG CGCCGTGCGC ACGGCGCAGA GGCCGGCATG CTGTCGGCTC GCGCCAGCTA CCTTGCGGGC TTCTCGGGCA CCGCCACGCT GCTCGCGGGC GTGCGCTACG GCATACCGGT GTACGGAACC ATGGCCCATG CGTATGTGCA GGCCCATCGC GATGAAGCGC AGGCCTTCGA ATCGTTCGCG CGTTCGCAAC CCACCAACAC CACGCTGCTG ATCGATACCT ACGACACGGA AGCGGCCGCA AGAAAGGTCG TGGAACTGGC CCGCAAGCTG TGCGGTGACG GCATCACCAT CCAGGCCGTC CGGCTGGACA GCGGCGATCT CGATTGGCAT GCCAGGCAGG TTCGGCAGAT TCTGGATGAG GGCGGCGCCC CGGAAATCAG CATCTTCGCC AGCGGCAATC TGGACGAGTA TCGCGTCCGG GATCTCGTCC GGGGTGGTGC CCCCATCCAC GGTTTCGGTG TCGGCACCCG CATGAACACG TCGGCCGACG CCCCCTACCT GGATTGCGCC TACAAGCTGA CCGAGTATGC GGGCTTGCCA CGCCGCAAAC GCTCCGAAGG CAAGGCGACG TGGCCCGGCC GCAAGCAGGT GTACCGCCGT TACACCCCCA CAGGCAGGAT CCTTGGCGAT GCGCTGACCA TCGAAGGAGA CCAGTGCGAG GGCGTGCCGC TGTTGCAGCC CTATGTCCGC GCAGGCGAAC GCGTGCAAGC GCTGCCATCA CTGGAAGCTG CTCGCGTCCA TGCGCAGGCG CAACTGAACG CCCTGCCGCC GCACCTGCGC GCACTGGAGG CCGGTGAGCC CTACCCCGTG CTGGTCCGGC AGGCGCTCGT CGAACTGGCG CGGATGGCAG ACGACATTGC TGCCGGCCGC CCGCGCCACT GA
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Protein sequence | MATSPICTSP LLTDLYELTM MQAYRDAGMD GIASFECFVR KLPPGRNFLM AAGLEQVLDF LASLRFSEDE VASLAALGRF DDAFLQSLLD LRFTGDVHAM PEGTLFFPDE PILRIVAPLR EAQLVESRVM NLLHYETLVA SKAARVALAA QGRLLVDFGL RRAHGAEAGM LSARASYLAG FSGTATLLAG VRYGIPVYGT MAHAYVQAHR DEAQAFESFA RSQPTNTTLL IDTYDTEAAA RKVVELARKL CGDGITIQAV RLDSGDLDWH ARQVRQILDE GGAPEISIFA SGNLDEYRVR DLVRGGAPIH GFGVGTRMNT SADAPYLDCA YKLTEYAGLP RRKRSEGKAT WPGRKQVYRR YTPTGRILGD ALTIEGDQCE GVPLLQPYVR AGERVQALPS LEAARVHAQA QLNALPPHLR ALEAGEPYPV LVRQALVELA RMADDIAAGR PRH
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