Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3568 |
Symbol | |
ID | 8021255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 115281 |
End bp | 117047 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832359 |
Product | acetyl-CoA synthetase |
Protein accession | YP_002983500 |
Protein GI | 241665141 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0207513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0354675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAT CACCGATCAT CCACAAGACC GCTGCGGACC TGCGGGTCCG GCCCAACCTT GCGGACTACG AAGCCGAGTG CCGCCGTTTT TCGTGGGAGG CCGTCCGCCG CGAGTTGACG GGCGGACCGC CAGGCGTGGT CAATATCGCC TGGCACGCGG TGGACCGGCA TGTCGCGGGC GGGGCCGGCA ACCAGACCGC GTTCCGCTTC CTGGCGATCG GCGCCCCCTG CCACACGGTC AGCTACGCGC AGTTGTCCGC GCAGACCAAC CGCTTCTGCA ATGTGTTGCG GGCGCTGGGC ATCGGCAAGG GCGATCGGCT CTTCATCCTC GCCGGGCGCA TTCCCGAGCT ATATGTCGGC CTGCTCGGTG CCCTCAAGAA CGGCACCGTG GTCTCGCCGC TGTTTTCAGC CTTCGGCCCT GAGCCGATCG CCACACGCAT CCAACTCGGC GACGGTACGG TGCTGCTGAC CACCGATGCG CTCTATGCGC GCAAGGTTGC CAAGTGGCGC GACCGCATGC CGACCCTCAA GCATGTGCTG CTGGTGGCCG AAGACGGCGG CGTGACATCC GTGCCCGGCA CGCTCGACCT GGGTTCGCTG CTGTGCCAGG CTTCGGACGC CTGCGAGATC ACGCCCACCG TCGCGGACGA CATGGCGCTG CTGCACTTCA CCAGCGGCAC GACGGGCACA CCGAAAGGCG CTGTCCACGT GCACGGCGCG GTCGCCACCC ATTGGGCGAC AGGCAAGTAC GCGCTCGACC TCCACCCCAG CGACATCTAC TGGTGCACCG CCGATCCAGG CTGGGTGACG GGCACCTCCT ACGGCACCAT CGCACCGCTG CTGCACGGCG TGACCTCCAT CGTTGACCGG GAAGAGTTTG ACGCTGAACG CTGGTACGGC ATCCTGCGTG ATGAGCGTGT CAGCGTCTGG TACACGGCGC CCACGGCGAT CCGCATGCTG ATGAAAGCGG GGCCGGACCT GGCCCGGCGA TACGCGCTTG CCCCGCTTCG CTTCATCGCC AGCGTGGGCG AGCCGCTGAA TCCGGAAGCC GTCTGGTGGG GCAAGGACGT CCTGGGCCTG CCGATCCATG ACAACTGGTG GCAGACCGAG ACCGGCGGCA TCATGATCGC CAACACTCCC GCTTTCGACA TCAAGCCGGG CTCGATGGGC AGACCGCTGC CCGGTGTGGA GGCGGCGATC GTGCAACGCC ACGAAGACGG CACCGTGGTG GTGGTCGACC AGCCCGATCA GCAAGGCGAG CTTGCGCTCA GGCAAGGCTG GCCTTCGATG TTTCGCGGCT ATCTCAACAA TGACGAACGC TACCGCAAGA GTTTTGCCGG CGAGTGGTAC CTGACCGGCG ATCTGGCCAG GCGCGATGCC GACGGCTACT ACTGGTTTGT CGGCCGCGCC GACGACGTCA TCAAATCCGC CGGCCACCTC ATCGGCCCGT TCGAAGTCGA AAGTGCGCTG ATGGAACACC CCGCCGTGGC CGAAGCCGGT GTGATCGGCA AACCGGACCC GGTCGTCGGT GAAGTGGTCA AGGCATTCGT GTCGCTCAAC CCGGGGTTCA CGCCTGGCGA TGCCCTGCGC ATGGAACTCC TTGCGCACGC CAGAACGCGG CTGGGTGCGG CGGTGGCCCC GAAGGAAATC GCCTTCCTGG AGCTGTTGCC GCGCACGCGC AGCGGCAAGA TCATGCGGCG TCTGCTCAAG GCGCGCGAGC TTGGCCTGCC CGAAGGCGAT ACATCGACAC TGGAGGGCGG CGCATGA
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Protein sequence | MDTSPIIHKT AADLRVRPNL ADYEAECRRF SWEAVRRELT GGPPGVVNIA WHAVDRHVAG GAGNQTAFRF LAIGAPCHTV SYAQLSAQTN RFCNVLRALG IGKGDRLFIL AGRIPELYVG LLGALKNGTV VSPLFSAFGP EPIATRIQLG DGTVLLTTDA LYARKVAKWR DRMPTLKHVL LVAEDGGVTS VPGTLDLGSL LCQASDACEI TPTVADDMAL LHFTSGTTGT PKGAVHVHGA VATHWATGKY ALDLHPSDIY WCTADPGWVT GTSYGTIAPL LHGVTSIVDR EEFDAERWYG ILRDERVSVW YTAPTAIRML MKAGPDLARR YALAPLRFIA SVGEPLNPEA VWWGKDVLGL PIHDNWWQTE TGGIMIANTP AFDIKPGSMG RPLPGVEAAI VQRHEDGTVV VVDQPDQQGE LALRQGWPSM FRGYLNNDER YRKSFAGEWY LTGDLARRDA DGYYWFVGRA DDVIKSAGHL IGPFEVESAL MEHPAVAEAG VIGKPDPVVG EVVKAFVSLN PGFTPGDALR MELLAHARTR LGAAVAPKEI AFLELLPRTR SGKIMRRLLK ARELGLPEGD TSTLEGGA
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