Gene Rpic12D_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3459 
Symbol 
ID8021144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3646655 
End bp3647092 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content64% 
IMG OID644832252 
Producthypothetical protein 
Protein accessionYP_002983394 
Protein GI241665034 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG TGCTGCTGAT TCTGCTGCGC ATCTACAAAG TGGCGTTCAG CCCGTTTGTG 
GGCGCGCAAT GCCGTTTTCT CCCGACCTGT TCCGACTACG CGCGCGATGC CGTGCTCGCT
CATGGGCCCG GTTACGGCAG TTATCTTGCG GCAAAACGTC TATGCCGCTG CCATCCGTTC
GCACAAGGCG GGTATGATCC TGTGCCGCCC GCTGCTGGCG ACGCTGTGCC CCGCTCCACC
GATCCCGCAT CGACCGACGC GACCGCAGCT GACTCCCAGC CTGCGCGGCC GTCGATCCAG
GCAGTTCCGG AAAACGTAGC GAGCAGTCCG AGGGTGGACC GAGAAGCGCA ACCGTACAAG
GGTACGGCGA GCATCGCAGG TTCAAGTTCG GGCTGCGCAG CCGTTTTTCG GCGCTGGCTT
CACCTTCCCA GACCGTAA
 
Protein sequence
MTRVLLILLR IYKVAFSPFV GAQCRFLPTC SDYARDAVLA HGPGYGSYLA AKRLCRCHPF 
AQGGYDPVPP AAGDAVPRST DPASTDATAA DSQPARPSIQ AVPENVASSP RVDREAQPYK
GTASIAGSSS GCAAVFRRWL HLPRP