Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3412 |
Symbol | |
ID | 8021097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3601750 |
End bp | 3603075 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644832206 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002983348 |
Protein GI | 241664988 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCT CGACCGCCAC CACGGCGGCG TTGCCTTCGC ACGCCGTTTC AAAAGAGGAC AGTGTCTACG CGCGCGTGTC GCGCCGCATC GTCCCGCTCA TCATGCTCTG CTACGTGGTC GCGTACCTCG ACCGCGTGAA CGTCGGGTTT GCGAAGCTGC AGATGTCGCA GGCGCTGAAT TTTTCCGAGA CGGTGTACGG GCTCGGTGCC GGCATCTTCT TCATCGGCTA TTTCCTCTTC GAGGTGCCGA GCAATCTGCT GATGAACAAG ATCGGCGCGC GCATCTGGAT CGCGCGGATC ATGATCACCT GGGGTTTGAT CTCGGGCGCG TTTGCATTTG TGCAGACGCC CACGCAGTTC TACGCGATGC GCTTCCTCCT GGGCTTGGCG GAAGCGGGTT TCTACCCCGG CATCATCCTG TACCTGACGT ACTGGTATCC GTCGCATCGC CGCGCGCGCA TCGTGGCGAT GTTCATGGCG GCCATTCCCA TCTCGGGCAT CTTCGGCAAC CCGCTGTCGG GCTGGATCAT GAGTGCGTTT CACGGAGCGG GCGCAGCCGG CGGCTGGCAG GGCTGGCAGT GGATGTTCGT GATCGAAGCC ATCCCTGCCG TGCTCGTTGG GCTGCTGGTG CTCTGGAAGT TCGATGACAG CATCCGCAAG GCCAAGTGGC TGTCGGAAGA CGAGAAGCAG ATCCTCGAAG CCAACATTGC GGCCGACAAC AAAGGCAAGA CCGAGCACCC CGGCATCGGC AAGGTCTTCT CCGACCCGCG CGTGTGGATG ATGAGCCTGA TCTACTTCGC CTTCGTCATG GGCCAGTACG GGCTGACGTT CTGGATGCCG ACGCTGGTGA AGAGCGCCGG CGTGAAAGAC ACCCTGATGG TGGGCGTGCT CTCCGCCATT CCGTATGTCT GTGCGGCGAT CACCATGGTG CTGATCGGCC GCAGCGCCGA TGCACGCCGC GAGCGCCGCT GGCACCTGGT TGTGCCGGCG CTGATGGGCG CAGTCGGTTT TGCCGTGGTG GCAATGGCGG GTCACAACGT GGCCCTGTCG ATCGTGTTCC TGTCTTTGGC CGCCGCGGGC GTGCTGACGT GCGCGCCGCT GTTCTGGTCC CTGCCGACGG CGTTCCTGCA AGGCACCGCT GCTGCGGCCG GCATTGCCGC CATCAACTCC GTCGGCAACT TGGCCGGCTT CGTGAGCCCC TATATGATCG GTGCGCTCAA GGACATGACG GGCAGCACAT CCGCCGGCAT GTACGCGCTG GCGGGCGTGC TGGTGCTCGG CTGCATTGCC GTGTTGCGCA CGCCGCCGAA GCTGGTCAAT AAATAA
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Protein sequence | MNTSTATTAA LPSHAVSKED SVYARVSRRI VPLIMLCYVV AYLDRVNVGF AKLQMSQALN FSETVYGLGA GIFFIGYFLF EVPSNLLMNK IGARIWIARI MITWGLISGA FAFVQTPTQF YAMRFLLGLA EAGFYPGIIL YLTYWYPSHR RARIVAMFMA AIPISGIFGN PLSGWIMSAF HGAGAAGGWQ GWQWMFVIEA IPAVLVGLLV LWKFDDSIRK AKWLSEDEKQ ILEANIAADN KGKTEHPGIG KVFSDPRVWM MSLIYFAFVM GQYGLTFWMP TLVKSAGVKD TLMVGVLSAI PYVCAAITMV LIGRSADARR ERRWHLVVPA LMGAVGFAVV AMAGHNVALS IVFLSLAAAG VLTCAPLFWS LPTAFLQGTA AAAGIAAINS VGNLAGFVSP YMIGALKDMT GSTSAGMYAL AGVLVLGCIA VLRTPPKLVN K
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