| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3410 |
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| Symbol | |
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| ID | 8021095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3599730 |
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| End bp | 3601043 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644832204 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_002983346 |
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| Protein GI | 241664986 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG CGCCCACGTC CCGCCCGGTC CTCGGTTGCA TCGCCGATGA CTTCACCGGT
GCGACCGACC TTGCCAACAT GCTCGTGCGC GCCAACATGC GCACGGTGCA GACCATCGGT
GTGCCGCAGG CAGGCGCCGG GGCCATCGCG GCGGATGCCG ATGCCATCGT CGTTGCGCTC
AAGTCGCGCA CGATTCCGGC GGCGGATGCC GTGGCGCAGT CGTTGAATGC GCTGCACTGG
CTGCGCGCGC AAGGCTGCTC GCGCTTCTTC TTCAAATACT GCTCGACGTT CGATTCCACC
GACGCCGGCA ACATCGGCCC CGTGGCCGAA GCGTTGATGG CTGAGCTGGG TACCGATTTC
ACATTGGCCT GCCCCGCCTT TCCCGAGAAC GGTCGCACGA TCTTTCGTGG CCATCTGTTC
GTGGGCGACG TGCTACTCAA CGCGTCGGGC ATGGAGCACC ATCCGTTGAC GCCGATGCGC
GATCCGAACC TCGTGTCGGT GCTTGCGCGC CAGAGTGCGG GCAAGGTCGG CCTGCTGCGG
TACGACACCG TCATGCGCGG TGTGCAGGCC GCTCGCGATC GGGCCCAGCA ATTGCGCGCC
GACGGCGTGA AGCTGGCAAT TGCCGATGCC ATTTCGAACG ACGACCTCAT CGTGCTGGGC
GAGGCATTTG CCGATCTACC GCTGCTCACC GGCGGCTCGG GCCTGGCGCT TGGCCTGCCG
GCGCAATATC GCCGCGCGGG GCTGATCACC GCGCACGGCA ACGCGGCGCA ACTGCCGATC
GTGGCCGATT CGGCGATCGT GCTGTCGGGC AGCTGTTCAC GTGCGACGAA CGCGCAGGTG
GCGCACTGGC GCGCATCGCG TCCGGCGTTC CAGGTGGATC CGCTGGCGCT GGCCGAAGGC
AAACCGGTGG TGGTCGAGGC GCTTGATTTC GTGCACCGCC ATGCAGGTCA GACGGTGCTG
GTATACGCCA CCAGTGCGCC GGAGCAAGTG GCACGCGTGC AGCAGATGCT GGGCGTGGAA
CGCGCCGGCA AGTTGGTGGA AGACGCACTG GGCCGCATCG CCCGCACGCT GCATGCCGAT
GGCGTGCGCC GCTTCGTGGT GGCCGGCGGC GAGACATCGG GCGCGGTGGT GCAGGCGCTC
GATGTGCGTG CGCTGCGCAT CGGCCCGCAG ATCGACCCAG GCGTCCCCTG GACGGCCACC
ATCGGCAACG ATCCGACTGC GCTGGCATTG AAGTCCGGCA ACTTCGGGAC GGTGGATTTC
TTCGAGAAGG CGCTTGCGCA ACTGGCGCAG GCCACAGCGG AGGCAGCGGT ATGA
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| Protein sequence | MSAAPTSRPV LGCIADDFTG ATDLANMLVR ANMRTVQTIG VPQAGAGAIA ADADAIVVAL
KSRTIPAADA VAQSLNALHW LRAQGCSRFF FKYCSTFDST DAGNIGPVAE ALMAELGTDF
TLACPAFPEN GRTIFRGHLF VGDVLLNASG MEHHPLTPMR DPNLVSVLAR QSAGKVGLLR
YDTVMRGVQA ARDRAQQLRA DGVKLAIADA ISNDDLIVLG EAFADLPLLT GGSGLALGLP
AQYRRAGLIT AHGNAAQLPI VADSAIVLSG SCSRATNAQV AHWRASRPAF QVDPLALAEG
KPVVVEALDF VHRHAGQTVL VYATSAPEQV ARVQQMLGVE RAGKLVEDAL GRIARTLHAD
GVRRFVVAGG ETSGAVVQAL DVRALRIGPQ IDPGVPWTAT IGNDPTALAL KSGNFGTVDF
FEKALAQLAQ ATAEAAV
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