| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3383 |
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| Symbol | |
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| ID | 8021068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3573423 |
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| End bp | 3575024 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644832177 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002983319 |
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| Protein GI | 241664959 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTCC TGCGTCTGCT GCGCGCTGCG AACCTTGTCG CCGCGCTGTC TTTTGCCACG
GCGCTTGCGG CGCTCACACC GATTGGGGCG CATGCCCAGC CGGCCTCCAC GCTGGTGGTT
GGCCTGTCGA GCGATGTTAC GTCGCTCGAT CCGCACTTCC ATAACGTCAC GCCCAATTCG
AACGTTGCCG AGCATATGTT CGAGGCGCTG ATCGCCAAGG ACGAGAAGAT GCGCCTCAAG
CCTGGCCTCG CCGTGTCGTG GAAAGCCCTG AGCGATACGG TGTGGGAGGT CAAGCTGCGT
CCCGGCGTGC ATTTCCATGA CGGCAGCGAG TTCACCTCGG CCGACGTCGT CTATTCGCTG
GCGCGCCCAG CCACCATCAA GAACAGCCCC TCGCCCTTCA CGATCTACAC GCGTGGTTTC
AAGGACGTGA CGGCCGTCGA CAAGCTGACC GTGCGCATCA CCACCAACGG CCCCTATCCG
CTGGTGCCGA ACGACCTGTC GACCATCTAC ATGGTGTCGA AAAAAGCGGT CGAAAAAGCC
GGCGCGGATG ACTTCAATAA CGGCCGCGCC ATGATCGGCA CGGGGCCGTA CAAGTTCGTC
TCCTTCAATC GTGGCGATCG GCTGGAGCTG ACGCGCTTTG ATGGCTACTG GGGCAAGAAG
CCGCAATGGC AGCACGTGAC GCTGCGCATT CTGACGGCGG ATGCACCTCG CGTGGCGGCG
CTGTTAGCGG GCGATGTGCA GGTCATCGAG AACGTGCCGA GCTCGGACAT CAAGAAGCTG
TCGGCCGACC CGGCGGTGTC GGTGTTCAAG ATGCCGGTGT TCCGCATGAT GTATCTGCAT
ATGGATTCGA ACCGCGATGT ATCGCCGTTC GTGACCGACA AGGCGGGCAA GCCGCTGCCG
AAGAATCCGC TCAAGGATGC ACGCGTACGC GAGGCGATCT CGCTGGCAAT TTCACGCCAG
GCCATCGTCG ATCGCGTGAT GGAGGGCGCG GCCGAACCGA CGGGCCAGCT CGTCAACAGC
GCGCTGTTCG GCCACGTGCC GGGCCTGAAG GCACCGTCGG CGGACCCCGC CGCAGCGAAA
AAGCTGCTCG GCCAGGCTGG CTACCCCGAC GGTTTTGCCA TCACGCTGCA TGCCACCAAC
AATCGCTATC CGAACGATGA CCGCGTCGCC CAGGTGATTG CGTCAATGCT TTCGCGGGTG
GGCATCGTGA CCAAGGTGGA GACGTTGCCG TCGGCGTCGT TTTTCACGCG GGCGAACAAG
CTGGACTTCT CGTTTCTGCA GGCGGGTTGG GGTGCCGATA CGGGGGAAGC CAGTTCCAGC
CTGAAAGCGC TGCTGGCCAC GTATGACCCG GCGCGCGGCT GGGGGGCATC CAATCGCGGG
CGTTATTCGA ACCCCGCACT CGACGCCAAG CTGGCTGAAG CGCTGCAGAC GCTGGACGAC
AGCAAGCGCG AAAAGCTGCT GCAGGAGGCC ACGGAAATCG GTATGCGCGA TTACGGCGTG
ATTCCGCTCT ACTTCAACAT CAACGTATGG GCAGCGCGCA AGGGCTACGC GGTGGTGCCG
CGTCTGGACG AGCGCACATA TGCATTCGAT GTGACGCGCT GA
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| Protein sequence | MPVLRLLRAA NLVAALSFAT ALAALTPIGA HAQPASTLVV GLSSDVTSLD PHFHNVTPNS
NVAEHMFEAL IAKDEKMRLK PGLAVSWKAL SDTVWEVKLR PGVHFHDGSE FTSADVVYSL
ARPATIKNSP SPFTIYTRGF KDVTAVDKLT VRITTNGPYP LVPNDLSTIY MVSKKAVEKA
GADDFNNGRA MIGTGPYKFV SFNRGDRLEL TRFDGYWGKK PQWQHVTLRI LTADAPRVAA
LLAGDVQVIE NVPSSDIKKL SADPAVSVFK MPVFRMMYLH MDSNRDVSPF VTDKAGKPLP
KNPLKDARVR EAISLAISRQ AIVDRVMEGA AEPTGQLVNS ALFGHVPGLK APSADPAAAK
KLLGQAGYPD GFAITLHATN NRYPNDDRVA QVIASMLSRV GIVTKVETLP SASFFTRANK
LDFSFLQAGW GADTGEASSS LKALLATYDP ARGWGASNRG RYSNPALDAK LAEALQTLDD
SKREKLLQEA TEIGMRDYGV IPLYFNINVW AARKGYAVVP RLDERTYAFD VTR
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