Gene Rpic12D_3380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3380 
Symbol 
ID8021065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3569994 
End bp3571073 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content61% 
IMG OID644832174 
Productcobalamin synthesis protein P47K 
Protein accessionYP_002983316 
Protein GI241664956 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAA TGATCCCCGT TACCATCCTG ACGGGCTTTC TCGGCAGCGG TAAGACCACG 
CTGCTCAAGC GCATCCTGAA CGAACAGCAC GGTATGAAGA TCGCCGTGAT CGAAAACGAG
TTCGGCGAAG AGAACATCGA CAACGACATC CTCGTGCAGG ACGGCAACGA GCAGATCGTG
CAGATGAGCA ACGGCTGCAT CTGCTGCACC ATCCGCGGCG ATCTGGTGAA GGGGTTGTCC
GATCTGCTGA CGCGCCGCGA CAACGGTCAA ATCCAGTTCG ATCGCGTGGT CATCGAAACC
ACCGGTGTGG CCAACCCGGG TCCGGTGGCA CAGACCTTCT TCATGGACGA CGAGATCGCC
AGCCGCTACC TGCTGGATGC CGTCATCACG CTGGTCGACG CCAAGCACGG CAACATGCAG
CTCGACAAGC AGGAAGAGGC GCAGCGCCAG GTGGGCTTTG CCGACGCCAT CTTCATCACC
AAGAGCGATC TGGTGTCCGC CGACGATGTG GATGCGCTGC GCCACCGCCT GCTGCACATG
AACCCCCGCG CCCCGATCCG CACCGCCAAT TTTGGTGACG CGCCGATCGA CACCATCTTC
GACCTGCGGG GCTTCAACCT GAATGCCAAG CTGGAGATCG ACCCCGACTT CCTGCGCGAA
GACGGTCATG ATCACAACCA CGATCACGAT CACGACCACG CCTGCTCGGC CGACTGCGAT
CACGACCACG ATCATGAGCA CCACGGTCAC GGCCATCACC ACCATCACGG GCATGCGCAC
CATACCGACC GCATCGCCTC GTTCGTCTTC CGCAGCGAAC GGCCGTTCAA CTACACCAAG
CTGGAGGAGT TCCTCTCCGG CGTGCTGAAC ATCTACGGCG AGAAGCTGCT GCGCTACAAG
GGCGTGCTTT ACATGGAGGG CGTCGACCGC AAGGTCGTAT TCCAGGGTGT GCACCAGCTC
ATGGGCAGCG ATGTGGGCGG CAAATGGGAC GGCGAGACCC CTTCCAACCG GATGGTGTTC
ATCGGTGTCG ACCTGCCGCG CGAAACGATT CTGAAAGGAT TGGAGAACTG CCTGGCCTGA
 
Protein sequence
MSKMIPVTIL TGFLGSGKTT LLKRILNEQH GMKIAVIENE FGEENIDNDI LVQDGNEQIV 
QMSNGCICCT IRGDLVKGLS DLLTRRDNGQ IQFDRVVIET TGVANPGPVA QTFFMDDEIA
SRYLLDAVIT LVDAKHGNMQ LDKQEEAQRQ VGFADAIFIT KSDLVSADDV DALRHRLLHM
NPRAPIRTAN FGDAPIDTIF DLRGFNLNAK LEIDPDFLRE DGHDHNHDHD HDHACSADCD
HDHDHEHHGH GHHHHHGHAH HTDRIASFVF RSERPFNYTK LEEFLSGVLN IYGEKLLRYK
GVLYMEGVDR KVVFQGVHQL MGSDVGGKWD GETPSNRMVF IGVDLPRETI LKGLENCLA