Gene Rpic12D_3371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3371 
Symbol 
ID8021056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3560424 
End bp3561386 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content72% 
IMG OID644832165 
Productdienelactone hydrolase 
Protein accessionYP_002983307 
Protein GI241664947 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTAT TGCTTCGCGT GGTGGCCGCG CTGGCCGGCG CCCTGGCGCT GCACGCCGCC 
GCGCAACCGA CGCCGGACGC CGAAGGCGCT CTGCCGGATA TGCCGGCTGC GCGTGCGCCA
TCGGCGGCCG AGCTGGGCGT GCAGACGGTG GAGATTCCCC GTGCGTCCAT GAAAGACGCC
GAGGATGCGC CGCCAACGTT GACCGCCTAC TGGGTCGCGT CGCCCGTCAA GGCGCCTGCG
ACCGGTACGC CGGTGGTGAT CGCGCTGCAC GGCTGCAGCG GCCTGTATAC GCCGGCTGGG
GCGGATGCCA AGGCGCTGGG CTCGCGGTAT CGCGGTTATG CGCAGTGGCT GGGCGCGCGT
GGTTACGCGG TGGTGTTTCC CGACAGTTTC GGCCCGCGCG GCAAACCGCA CGGCATCTGC
ACCGAACGCA CCGCCACGCG CGATATCAAC GGCGCAGTAC GCCGCGCCGA CGTGCTGGCG
ACGATCCGCT GGGTGGCGGG GCAGCCGGGC GTGGATGCGC GCCGCATCGT GCTGCTCGGC
TGGTCCAACG GCGCGCAGGC CGTGCTGGAG GCCGTGGACG CCAGCCGCGC CTGGCCCGCC
GACACGCCCG TGGTCAATCG CGCGGTGGCC TTCTATCCGG GCTGTGCGTC GGCGCAGAAG
CGGCCGGACT ATCGGCTGAA TGCGCCATTG CTGCTGCTGG CCGGCGGCAA CGACGACTGG
ACGCCGGCTG ATCACTGCCA GGCGCTGCAG ACGGCCGTCC TGGCGCGCCA GCCGCAGGCG
CGTTTCGAGC TGGACATGTT TGGCGGCGCG TATCACGGCT TTGACGGCAC CGCCGCAGTC
ACGGAGCGCA ACGGCGTCCC GAAGGGACGT CGCTACGGAA CGGTCACCGT CGGTGGCGAT
CCGGCAGCGC GCGAGGCCGC GTTCGCGAAG CTCGCGGCGT GGCTCGATGC GCCGCACCCG
TGA
 
Protein sequence
MRLLLRVVAA LAGALALHAA AQPTPDAEGA LPDMPAARAP SAAELGVQTV EIPRASMKDA 
EDAPPTLTAY WVASPVKAPA TGTPVVIALH GCSGLYTPAG ADAKALGSRY RGYAQWLGAR
GYAVVFPDSF GPRGKPHGIC TERTATRDIN GAVRRADVLA TIRWVAGQPG VDARRIVLLG
WSNGAQAVLE AVDASRAWPA DTPVVNRAVA FYPGCASAQK RPDYRLNAPL LLLAGGNDDW
TPADHCQALQ TAVLARQPQA RFELDMFGGA YHGFDGTAAV TERNGVPKGR RYGTVTVGGD
PAAREAAFAK LAAWLDAPHP