Gene Rpic12D_3366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3366 
Symbol 
ID8021051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3555186 
End bp3556232 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content69% 
IMG OID644832160 
Productrod shape-determining protein MreC 
Protein accessionYP_002983302 
Protein GI241664942 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACT CCCCGCCGCC CCTCTTCAAG CAGGGCCCGT CCGCCACCGC GCGGCTGGTC 
GCCTTGCTCG CGCTTGCGCT TGCGTTGCTC GTGATCGATG CCCGCATGTC CGTGCTGGGC
GTGGTCCGGC AAGTCGTGTC GGTCATCCTG TACCCCGTCG AGCGCCTGGT GCTGATTCCA
CGCGATACGG CACGCGCCGC GCTCGAATAC ACGCAGTCGT CCACCAAGCT GGCCGTCGAT
AACCGCAGCC TGCGCGAATC GGCCGTTGCC CAGGCGCAGC AATCGCTGCG CGCCTCGCAG
CTCGAAGCCG AAAACCGGAA TCTGCGCACG CTGCTGAATC TGAAGCAGCA CGCCGCGGTG
CCCACGGTAG CGGCCGAAGT CCTCTACGAA GCACGTGACC CTTATACGCA GCGCATCGTG
ATCGATCGCG GCTCGAAGGA CGGCGTGCGC GCGGGCTACC CCGTCATCGA CGACCGCGGC
GTGGTCGGGC AGGTGACGCG CGTGTCGCTG TTCGAATCGC AAGTCACGCT GCTGACGGAC
AAGGACCAGG CGATCCCCGT GGAGGTCGTG CGCAACGGCC TGCGCAGCGT GGCCTTCGGC
GGTGCCCGGC CGGGCGCGCT GGACCTGCGC TTCATGGCCG CCTCGGCCGA TTTGCAGCAG
GGCGACCTGC TGGTCACGTC GGGGCTGGAC GGCGTCTATC CGGCTGGCCT GCCGGTGGCG
CGTATTTCGC AAATCGAGCG CAAGGCTGAT ACCGCGTTCT CACGCGTGAT TTGCGAGCCG
GTGGCCGGCA TCCGCAGCAA CCGGCACCTG CTGATCGTGA AGTACGAATC GGGCTTCCCG
CCGCCGACGG ATCTGGCGCC GCCGCCCGCA GCCAAGGGCA AGAACGCTGC CCGCGACGCC
CGCGAAGAGA AGGATCGCGC CGCACGCGCC GCCGCCGAAG CCAATGTGCC GGCGCCCGCG
CCGGCCGCCG AAGAAAACGC CCCGCCGCCG CGCCCGACCG ACGCCGACGG CAATCCGCTG
GACACCGATT CAGCGCAAAA ACGCTGA
 
Protein sequence
MDYSPPPLFK QGPSATARLV ALLALALALL VIDARMSVLG VVRQVVSVIL YPVERLVLIP 
RDTARAALEY TQSSTKLAVD NRSLRESAVA QAQQSLRASQ LEAENRNLRT LLNLKQHAAV
PTVAAEVLYE ARDPYTQRIV IDRGSKDGVR AGYPVIDDRG VVGQVTRVSL FESQVTLLTD
KDQAIPVEVV RNGLRSVAFG GARPGALDLR FMAASADLQQ GDLLVTSGLD GVYPAGLPVA
RISQIERKAD TAFSRVICEP VAGIRSNRHL LIVKYESGFP PPTDLAPPPA AKGKNAARDA
REEKDRAARA AAEANVPAPA PAAEENAPPP RPTDADGNPL DTDSAQKR