| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3356 |
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| Symbol | def |
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| ID | 8021041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3541329 |
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| End bp | 3541844 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644832150 |
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| Product | peptide deformylase |
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| Protein accession | YP_002983292 |
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| Protein GI | 241664932 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.253244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCTAC TGAATATCCT GCAATACCCT GACCCGAGGC TGCACAAAGT CGCCAAGCCG
GTTGCCGTTG TGGATGACCG CATCCGCAAA CTCGTCGCCG ATATGGCCGA GACCATGTAT
GAGGCACCCG GAGTGGGCCT GGCCGCCACG CAGGTCGACG TGCACGAGCG CGTGATCACC
ATCGACGTGT CCGAGTCGCG AGACGAGCTG CGCGTGTTCA TCAACCCGGA GATCCTCTGG
GCAAGTGACG AGCACAAGGT CTGGGACGAA GGCTGCCTGT CGGTGCCTGA TATCTATGAC
AAGGTCGACC GGCCGGCCCG TGTGCGCGTG CGCGCACTGA ACGAGAAGGG CGAAACGTTC
GAACTGGAAG CCGACGACCT GCTGGCCGTC TGCATCCAGC ACGAGATGGA TCATCTGATG
GGCAAGGTCT TCGTTGAATA CCTCTCGCCG CTCAAGCAGA CGCGTATCCG CTCAAAGCTC
AAGAAGCATC AACGCGACGC TGCACCCCAG CGTTGA
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| Protein sequence | MALLNILQYP DPRLHKVAKP VAVVDDRIRK LVADMAETMY EAPGVGLAAT QVDVHERVIT
IDVSESRDEL RVFINPEILW ASDEHKVWDE GCLSVPDIYD KVDRPARVRV RALNEKGETF
ELEADDLLAV CIQHEMDHLM GKVFVEYLSP LKQTRIRSKL KKHQRDAAPQ R
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